| | | Deletion | Partial congenital absence of teeth | |
| | | Duplication (intron variant) | PAX9-related disorder | |
| | | Single nucleotide variant (missense variant) | not provided | |
| | | Single nucleotide variant (missense variant) | not provided | |
| | | Single nucleotide variant (missense variant) | Tooth agenesis, selective, 3 | |
| | | Duplication (frameshift variant) | Tooth agenesis, selective, 3 | |
| | | Deletion (frameshift variant) | Tooth agenesis, selective, 3 | |
| | | Single nucleotide variant (missense variant) | Tooth agenesis, selective, 3 | |
| | | Single nucleotide variant (intron variant) | not provided | |
| | | Single nucleotide variant (intron variant) | not provided | |
| | | Single nucleotide variant (intron variant) | not provided | |
| | | Single nucleotide variant (intron variant) | not provided | |
| | | Single nucleotide variant (intron variant) | not provided | |
| | | Single nucleotide variant (5 prime UTR variant) | Tooth agenesis, selective, 3 | |
| | | Single nucleotide variant (5 prime UTR variant) | Tooth agenesis, selective, 3 | |
| | | Single nucleotide variant (missense variant) | Tooth agenesis, selective, 3 | |
| | | Copy number gain | See cases | |
| | | Insertion | Tooth agenesis, selective, 3 | |