| | | Duplication (frameshift variant) | Spondylometaphyseal dysplasia-cone-rod dystrophy syndrome | |
| | | Single nucleotide variant (stop lost) | not provided +1 more | |
| | | Single nucleotide variant (missense variant) | not provided +1 more | |
| | | Single nucleotide variant (nonsense) | Spondylometaphyseal dysplasia-cone-rod dystrophy syndrome | |
| | PCYT1A, LOC126806932 (N130S) | Single nucleotide variant (missense variant) | Spondylometaphyseal dysplasia-cone-rod dystrophy syndrome +1 more | GConflicting classifications of pathogenicity |
| | | Single nucleotide variant (missense variant) | Spondylometaphyseal dysplasia-cone-rod dystrophy syndrome +1 more | |
| | | Duplication (frameshift variant) | not provided | GConflicting classifications of pathogenicity |
| | | Single nucleotide variant (missense variant) | Spondylometaphyseal dysplasia-cone-rod dystrophy syndrome | |
| | LOC126806932, PCYT1A (E129K) | Single nucleotide variant (missense variant) | Spondylometaphyseal dysplasia-cone-rod dystrophy syndrome | |
| | | Single nucleotide variant (missense variant) | Spondylometaphyseal dysplasia-cone-rod dystrophy syndrome | |
| | | Deletion (frameshift variant) | Spondylometaphyseal dysplasia-cone-rod dystrophy syndrome +1 more | GConflicting classifications of pathogenicity |
| | | Single nucleotide variant (nonsense) | Spondylometaphyseal dysplasia-cone-rod dystrophy syndrome +1 more | GConflicting classifications of pathogenicity |
| | | Single nucleotide variant (missense variant) | Spondylometaphyseal dysplasia-cone-rod dystrophy syndrome | |
| | LOC126806932, PCYT1A (P150A) | Single nucleotide variant (missense variant) | Spondylometaphyseal dysplasia-cone-rod dystrophy syndrome +1 more | GPathogenic/Likely pathogenic |
| | | Single nucleotide variant (missense variant) | not provided +2 more | |