estd22 (Levy et al. 2007)
- Organism:
- Human
- Study Type:
- Control Set
- Submitter:
- Database of Genomic Variants
- Submitter URL:
- http://www.jcvi.org/
- Description:
- Presented here is a genome sequence of an individual human. It was produced from 32 million random DNA fragments, sequenced by Sanger dideoxy technology and assembled into 4,528 scaffolds, comprising 2,810 million bases (Mb) of contiguous sequence with approximately 7.5-fold coverage for any given region. We developed a modified version of the Celera assembler to facilitate the identification and comparison of alternate alleles within this individual diploid genome. Comparison of this genome and the National Center for Biotechnology Information human reference assembly revealed more than 4.1 million DNA variants, encompassing 12.3 Mb. These variants (of which 1,288,319 were novel) included 3,213,401 single nucleotide polymorphisms (SNPs), 53,823 block substitutions (2-206 bp), 292,102 heterozygous insertion/deletion events (indels)(1-571 bp), 559,473 homozygous indels (1-82,711 bp), 90 inversions, as well as numerous segmental duplications and copy number variation regions. Non-SNP DNA variation accounts for 22% of all events identified in the donor, however they involve 74% of all variant bases. This suggests an important role for non-SNP genetic alterations in defining the diploid genome structure. Moreover, 44% of genes were heterozygous for one or more variants. Using a novel haplotype assembly strategy, we were able to span 1.5 Gb of genome sequence in segments .200 kb, providing further precision to the diploid nature of the genome. These data depict a definitive molecular portrait of a diploid human genome that provides a starting point for future genome comparisons and enables an era of individualized genomic information. See Variant Summary counts for estd22 in dbVar Variant Summary.
- Publication(s):
- Levy et al. 2007
Detailed Information: Download 780358 Variant Regions, Download 780358 Variant Calls, Download Both, FTP
Variant Summary
Assembly used for analysis:
Remapped: GRCh38.p12 (hg38)
Remapped: GRCh37.p13 (hg19)
Submitted: NCBI36 (hg18)
Sequence ID | Chr | Number of Variant Regions | Number of Variant Calls | Placement type | Link to graphical display |
---|---|---|---|---|---|
NC_000001.11 | Chr1 | 60,720 | 60,720 | Remapped | NC_000001.11 |
NC_000002.12 | Chr2 | 64,810 | 64,810 | Remapped | NC_000002.12 |
NC_000003.12 | Chr3 | 50,110 | 50,110 | Remapped | NC_000003.12 |
NC_000004.12 | Chr4 | 56,385 | 56,385 | Remapped | NC_000004.12 |
NC_000005.10 | Chr5 | 46,906 | 46,906 | Remapped | NC_000005.10 |
NC_000006.12 | Chr6 | 46,536 | 46,536 | Remapped | NC_000006.12 |
NC_000007.14 | Chr7 | 45,089 | 45,089 | Remapped | NC_000007.14 |
NC_000008.11 | Chr8 | 38,214 | 38,214 | Remapped | NC_000008.11 |
NC_000009.12 | Chr9 | 30,060 | 30,060 | Remapped | NC_000009.12 |
NC_000010.11 | Chr10 | 39,189 | 39,189 | Remapped | NC_000010.11 |
NC_000011.10 | Chr11 | 36,953 | 36,953 | Remapped | NC_000011.10 |
NC_000012.12 | Chr12 | 38,252 | 38,252 | Remapped | NC_000012.12 |
NC_000013.11 | Chr13 | 29,500 | 29,500 | Remapped | NC_000013.11 |
NC_000014.9 | Chr14 | 25,285 | 25,285 | Remapped | NC_000014.9 |
NC_000015.10 | Chr15 | 23,557 | 23,557 | Remapped | NC_000015.10 |
NC_000016.10 | Chr16 | 23,343 | 23,343 | Remapped | NC_000016.10 |
NC_000017.11 | Chr17 | 24,832 | 24,832 | Remapped | NC_000017.11 |
NC_000018.10 | Chr18 | 22,020 | 22,020 | Remapped | NC_000018.10 |
NC_000019.10 | Chr19 | 20,728 | 20,728 | Remapped | NC_000019.10 |
NC_000020.11 | Chr20 | 16,745 | 16,745 | Remapped | NC_000020.11 |
NC_000021.9 | Chr21 | 11,407 | 11,407 | Remapped | NC_000021.9 |
NC_000022.11 | Chr22 | 10,728 | 10,728 | Remapped | NC_000022.11 |
NC_000023.11 | ChrX | 17,439 | 17,439 | Remapped | NC_000023.11 |
NC_000024.10 | ChrY | 944 | 944 | Remapped | NC_000024.10 |
NT_167213.1 | Unplaced|NT_167213.1 | 1 | 1 | Remapped | NT_167213.1 |
NT_187500.1 | Unplaced|NT_187500.1 | 1 | 1 | Remapped | NT_187500.1 |
NT_187513.1 | Unplaced|NT_187513.1 | 3 | 3 | Remapped | NT_187513.1 |
NT_187361.1 | Chr1|NT_187361.1 | 13 | 13 | Remapped | NT_187361.1 |
NT_187514.1 | Chr1|NT_187514.1 | 24 | 24 | Remapped | NT_187514.1 |
NT_187515.1 | Chr1|NT_187515.1 | 59 | 59 | Remapped | NT_187515.1 |
NT_187516.1 | Chr1|NT_187516.1 | 162 | 162 | Remapped | NT_187516.1 |
NT_187517.1 | Chr1|NT_187517.1 | 1 | 1 | Remapped | NT_187517.1 |
NT_187518.1 | Chr1|NT_187518.1 | 47 | 47 | Remapped | NT_187518.1 |
NT_187519.1 | Chr1|NT_187519.1 | 176 | 176 | Remapped | NT_187519.1 |
NT_187521.1 | Chr1|NT_187521.1 | 13 | 13 | Remapped | NT_187521.1 |
NT_187646.1 | Chr1|NT_187646.1 | 47 | 47 | Remapped | NT_187646.1 |
NW_003315905.1 | Chr1|NW_003315905.1 | 57 | 57 | Remapped | NW_003315905.1 |
NW_003315906.1 | Chr1|NW_003315906.1 | 26 | 26 | Remapped | NW_003315906.1 |
NW_003315907.2 | Chr1|NW_003315907.2 | 75 | 75 | Remapped | NW_003315907.2 |
NW_009646194.1 | Chr1|NW_009646194.1 | 54 | 54 | Remapped | NW_009646194.1 |
NW_009646195.1 | Chr1|NW_009646195.1 | 40 | 40 | Remapped | NW_009646195.1 |
NW_009646196.1 | Chr1|NW_009646196.1 | 43 | 43 | Remapped | NW_009646196.1 |
NW_011332687.1 | Chr1|NW_011332687.1 | 162 | 162 | Remapped | NW_011332687.1 |
NW_011332688.1 | Chr1|NW_011332688.1 | 138 | 138 | Remapped | NW_011332688.1 |
NW_012132914.1 | Chr1|NW_012132914.1 | 19 | 19 | Remapped | NW_012132914.1 |
NW_014040925.1 | Chr1|NW_014040925.1 | 42 | 42 | Remapped | NW_014040925.1 |
NW_014040926.1 | Chr1|NW_014040926.1 | 130 | 130 | Remapped | NW_014040926.1 |
NW_014040927.1 | Chr1|NW_014040927.1 | 82 | 82 | Remapped | NW_014040927.1 |
NW_017852928.1 | Chr1|NW_017852928.1 | 95 | 95 | Remapped | NW_017852928.1 |
NW_018654706.1 | Chr1|NW_018654706.1 | 40 | 40 | Remapped | NW_018654706.1 |
NW_018654707.1 | Chr1|NW_018654707.1 | 33 | 33 | Remapped | NW_018654707.1 |
NW_018654708.1 | Chr1|NW_018654708.1 | 58 | 58 | Remapped | NW_018654708.1 |
NW_019805487.1 | Chr1|NW_019805487.1 | 8 | 8 | Remapped | NW_019805487.1 |
NT_187522.1 | Chr2|NT_187522.1 | 43 | 43 | Remapped | NT_187522.1 |
NT_187523.1 | Chr2|NT_187523.1 | 36 | 36 | Remapped | NT_187523.1 |
NT_187524.1 | Chr2|NT_187524.1 | 2 | 2 | Remapped | NT_187524.1 |
NT_187525.1 | Chr2|NT_187525.1 | 46 | 46 | Remapped | NT_187525.1 |
NT_187526.1 | Chr2|NT_187526.1 | 29 | 29 | Remapped | NT_187526.1 |
NT_187527.1 | Chr2|NT_187527.1 | 38 | 38 | Remapped | NT_187527.1 |
NT_187528.1 | Chr2|NT_187528.1 | 30 | 30 | Remapped | NT_187528.1 |
NT_187529.1 | Chr2|NT_187529.1 | 21 | 21 | Remapped | NT_187529.1 |
NT_187530.1 | Chr2|NT_187530.1 | 9 | 9 | Remapped | NT_187530.1 |
NT_187531.1 | Chr2|NT_187531.1 | 22 | 22 | Remapped | NT_187531.1 |
NT_187647.1 | Chr2|NT_187647.1 | 36 | 36 | Remapped | NT_187647.1 |
NT_187648.1 | Chr2|NT_187648.1 | 9 | 9 | Remapped | NT_187648.1 |
NW_003315908.1 | Chr2|NW_003315908.1 | 21 | 21 | Remapped | NW_003315908.1 |
NW_003315909.1 | Chr2|NW_003315909.1 | 52 | 52 | Remapped | NW_003315909.1 |
NW_003571033.2 | Chr2|NW_003571033.2 | 4 | 4 | Remapped | NW_003571033.2 |
NW_011332689.1 | Chr2|NW_011332689.1 | 53 | 53 | Remapped | NW_011332689.1 |
NW_011332690.1 | Chr2|NW_011332690.1 | 142 | 142 | Remapped | NW_011332690.1 |
NW_012132915.1 | Chr2|NW_012132915.1 | 31 | 31 | Remapped | NW_012132915.1 |
NW_015495299.1 | Chr2|NW_015495299.1 | 231 | 231 | Remapped | NW_015495299.1 |
NW_018654709.1 | Chr2|NW_018654709.1 | 27 | 27 | Remapped | NW_018654709.1 |
NW_018654710.1 | Chr2|NW_018654710.1 | 79 | 79 | Remapped | NW_018654710.1 |
NT_187678.1 | Chr3|NT_187678.1 | 47 | 47 | Remapped | NT_187678.1 |
NT_187688.1 | Chr3|NT_187688.1 | 54 | 54 | Remapped | NT_187688.1 |
NT_187689.1 | Chr3|NT_187689.1 | 63 | 63 | Remapped | NT_187689.1 |
NT_187690.1 | Chr3|NT_187690.1 | 56 | 56 | Remapped | NT_187690.1 |
NT_187691.1 | Chr3|NT_187691.1 | 53 | 53 | Remapped | NT_187691.1 |
NT_187532.1 | Chr3|NT_187532.1 | 67 | 67 | Remapped | NT_187532.1 |
NT_187533.1 | Chr3|NT_187533.1 | 63 | 63 | Remapped | NT_187533.1 |
NT_187534.1 | Chr3|NT_187534.1 | 63 | 63 | Remapped | NT_187534.1 |
NT_187535.1 | Chr3|NT_187535.1 | 29 | 29 | Remapped | NT_187535.1 |
NT_187536.1 | Chr3|NT_187536.1 | 65 | 65 | Remapped | NT_187536.1 |
NT_187537.1 | Chr3|NT_187537.1 | 66 | 66 | Remapped | NT_187537.1 |
NT_187538.1 | Chr3|NT_187538.1 | 69 | 69 | Remapped | NT_187538.1 |
NT_187539.1 | Chr3|NT_187539.1 | 22 | 22 | Remapped | NT_187539.1 |
NT_187649.1 | Chr3|NT_187649.1 | 55 | 55 | Remapped | NT_187649.1 |
NW_003315913.1 | Chr3|NW_003315913.1 | 39 | 39 | Remapped | NW_003315913.1 |
NW_003871060.2 | Chr3|NW_003871060.2 | 44 | 44 | Remapped | NW_003871060.2 |
NW_009646197.1 | Chr3|NW_009646197.1 | 81 | 81 | Remapped | NW_009646197.1 |
NW_011332691.1 | Chr3|NW_011332691.1 | 121 | 121 | Remapped | NW_011332691.1 |
NW_012132916.1 | Chr3|NW_012132916.1 | 75 | 75 | Remapped | NW_012132916.1 |
NW_017363813.1 | Chr3|NW_017363813.1 | 60 | 60 | Remapped | NW_017363813.1 |
NW_018654711.1 | Chr3|NW_018654711.1 | 40 | 40 | Remapped | NW_018654711.1 |
NW_019805488.1 | Chr3|NW_019805488.1 | 25 | 25 | Remapped | NW_019805488.1 |
NW_019805489.1 | Chr3|NW_019805489.1 | 39 | 39 | Remapped | NW_019805489.1 |
NW_019805490.1 | Chr3|NW_019805490.1 | 46 | 46 | Remapped | NW_019805490.1 |
NW_019805491.1 | Chr3|NW_019805491.1 | 25 | 25 | Remapped | NW_019805491.1 |
NW_019805492.1 | Chr3|NW_019805492.1 | 77 | 77 | Remapped | NW_019805492.1 |
NT_187679.1 | Chr4|NT_187679.1 | 159 | 159 | Remapped | NT_187679.1 |
NT_113793.3 | Chr4|NT_113793.3 | 16 | 16 | Remapped | NT_113793.3 |
NT_167250.2 | Chr4|NT_167250.2 | 89 | 89 | Remapped | NT_167250.2 |
NT_187540.1 | Chr4|NT_187540.1 | 93 | 93 | Remapped | NT_187540.1 |
NT_187541.1 | Chr4|NT_187541.1 | 39 | 39 | Remapped | NT_187541.1 |
NT_187542.1 | Chr4|NT_187542.1 | 34 | 34 | Remapped | NT_187542.1 |
NT_187543.1 | Chr4|NT_187543.1 | 54 | 54 | Remapped | NT_187543.1 |
NT_187544.1 | Chr4|NT_187544.1 | 46 | 46 | Remapped | NT_187544.1 |
NT_187545.1 | Chr4|NT_187545.1 | 89 | 89 | Remapped | NT_187545.1 |
NT_187650.1 | Chr4|NT_187650.1 | 55 | 55 | Remapped | NT_187650.1 |
NW_003315914.1 | Chr4|NW_003315914.1 | 67 | 67 | Remapped | NW_003315914.1 |
NW_003315915.1 | Chr4|NW_003315915.1 | 88 | 88 | Remapped | NW_003315915.1 |
NW_013171799.1 | Chr4|NW_013171799.1 | 14 | 14 | Remapped | NW_013171799.1 |
NW_013171800.1 | Chr4|NW_013171800.1 | 35 | 35 | Remapped | NW_013171800.1 |
NW_013171801.1 | Chr4|NW_013171801.1 | 62 | 62 | Remapped | NW_013171801.1 |
NW_017363814.1 | Chr4|NW_017363814.1 | 132 | 132 | Remapped | NW_017363814.1 |
NT_187546.1 | Chr5|NT_187546.1 | 48 | 48 | Remapped | NT_187546.1 |
NT_187547.1 | Chr5|NT_187547.1 | 50 | 50 | Remapped | NT_187547.1 |
NT_187548.1 | Chr5|NT_187548.1 | 72 | 72 | Remapped | NT_187548.1 |
NT_187549.1 | Chr5|NT_187549.1 | 46 | 46 | Remapped | NT_187549.1 |
NT_187550.1 | Chr5|NT_187550.1 | 20 | 20 | Remapped | NT_187550.1 |
NT_187551.1 | Chr5|NT_187551.1 | 43 | 43 | Remapped | NT_187551.1 |
NT_187651.1 | Chr5|NT_187651.1 | 43 | 43 | Remapped | NT_187651.1 |
NT_187652.1 | Chr5|NT_187652.1 | 56 | 56 | Remapped | NT_187652.1 |
NW_003315918.1 | Chr5|NW_003315918.1 | 13 | 13 | Remapped | NW_003315918.1 |
NW_003315919.1 | Chr5|NW_003315919.1 | 53 | 53 | Remapped | NW_003315919.1 |
NW_003315920.1 | Chr5|NW_003315920.1 | 9 | 9 | Remapped | NW_003315920.1 |
NW_003571036.1 | Chr5|NW_003571036.1 | 79 | 79 | Remapped | NW_003571036.1 |
NW_009646199.1 | Chr5|NW_009646199.1 | 42 | 42 | Remapped | NW_009646199.1 |
NW_016107297.1 | Chr5|NW_016107297.1 | 60 | 60 | Remapped | NW_016107297.1 |
NW_016107298.1 | Chr5|NW_016107298.1 | 263 | 263 | Remapped | NW_016107298.1 |
NW_018654712.1 | Chr5|NW_018654712.1 | 42 | 42 | Remapped | NW_018654712.1 |
NT_187692.1 | Chr6|NT_187692.1 | 58 | 58 | Remapped | NT_187692.1 |
NT_167246.2 | Chr6|NT_167246.2 | 1,097 | 1,097 | Remapped | NT_167246.2 |
NT_167247.2 | Chr6|NT_167247.2 | 839 | 839 | Remapped | NT_167247.2 |
NT_167248.2 | Chr6|NT_167248.2 | 20 | 20 | Remapped | NT_167248.2 |
NT_167249.2 | Chr6|NT_167249.2 | 576 | 576 | Remapped | NT_167249.2 |
NT_167245.2 | Chr6|NT_167245.2 | 760 | 760 | Remapped | NT_167245.2 |
NT_113891.3 | Chr6|NT_113891.3 | 10 | 10 | Remapped | NT_113891.3 |
NT_167244.2 | Chr6|NT_167244.2 | 301 | 301 | Remapped | NT_167244.2 |
NT_187552.1 | Chr6|NT_187552.1 | 11 | 11 | Remapped | NT_187552.1 |
NT_187553.1 | Chr6|NT_187553.1 | 66 | 66 | Remapped | NT_187553.1 |
NT_187554.1 | Chr6|NT_187554.1 | 36 | 36 | Remapped | NT_187554.1 |
NT_187555.1 | Chr6|NT_187555.1 | 66 | 66 | Remapped | NT_187555.1 |
NT_187556.1 | Chr6|NT_187556.1 | 179 | 179 | Remapped | NT_187556.1 |
NT_187557.1 | Chr6|NT_187557.1 | 23 | 23 | Remapped | NT_187557.1 |
NW_003315921.1 | Chr6|NW_003315921.1 | 26 | 26 | Remapped | NW_003315921.1 |
NW_004166862.2 | Chr6|NW_004166862.2 | 88 | 88 | Remapped | NW_004166862.2 |
NW_009646200.1 | Chr6|NW_009646200.1 | 96 | 96 | Remapped | NW_009646200.1 |
NW_012132918.1 | Chr6|NW_012132918.1 | 44 | 44 | Remapped | NW_012132918.1 |
NW_013171802.1 | Chr6|NW_013171802.1 | 60 | 60 | Remapped | NW_013171802.1 |
NW_013171803.1 | Chr6|NW_013171803.1 | 29 | 29 | Remapped | NW_013171803.1 |
NW_017363815.1 | Chr6|NW_017363815.1 | 42 | 42 | Remapped | NW_017363815.1 |
NW_018654713.1 | Chr6|NW_018654713.1 | 79 | 79 | Remapped | NW_018654713.1 |
NT_187558.1 | Chr7|NT_187558.1 | 45 | 45 | Remapped | NT_187558.1 |
NT_187559.1 | Chr7|NT_187559.1 | 51 | 51 | Remapped | NT_187559.1 |
NT_187560.1 | Chr7|NT_187560.1 | 102 | 102 | Remapped | NT_187560.1 |
NT_187561.1 | Chr7|NT_187561.1 | 35 | 35 | Remapped | NT_187561.1 |
NT_187562.1 | Chr7|NT_187562.1 | 338 | 338 | Remapped | NT_187562.1 |
NT_187563.1 | Chr7|NT_187563.1 | 21 | 21 | Remapped | NT_187563.1 |
NT_187564.1 | Chr7|NT_187564.1 | 149 | 149 | Remapped | NT_187564.1 |
NT_187653.1 | Chr7|NT_187653.1 | 47 | 47 | Remapped | NT_187653.1 |
NW_003315922.2 | Chr7|NW_003315922.2 | 36 | 36 | Remapped | NW_003315922.2 |
NW_012132919.1 | Chr7|NW_012132919.1 | 42 | 42 | Remapped | NW_012132919.1 |
NW_017852929.1 | Chr7|NW_017852929.1 | 87 | 87 | Remapped | NW_017852929.1 |
NW_017852930.1 | Chr7|NW_017852930.1 | 47 | 47 | Remapped | NW_017852930.1 |
NW_018654714.1 | Chr7|NW_018654714.1 | 112 | 112 | Remapped | NW_018654714.1 |
NW_018654715.1 | Chr7|NW_018654715.1 | 117 | 117 | Remapped | NW_018654715.1 |
NW_019805493.1 | Chr7|NW_019805493.1 | 103 | 103 | Remapped | NW_019805493.1 |
NT_187680.1 | Chr8|NT_187680.1 | 67 | 67 | Remapped | NT_187680.1 |
NT_187565.1 | Chr8|NT_187565.1 | 105 | 105 | Remapped | NT_187565.1 |
NT_187566.1 | Chr8|NT_187566.1 | 7 | 7 | Remapped | NT_187566.1 |
NT_187567.1 | Chr8|NT_187567.1 | 67 | 67 | Remapped | NT_187567.1 |
NT_187568.1 | Chr8|NT_187568.1 | 64 | 64 | Remapped | NT_187568.1 |
NT_187569.1 | Chr8|NT_187569.1 | 26 | 26 | Remapped | NT_187569.1 |
NT_187570.1 | Chr8|NT_187570.1 | 10 | 10 | Remapped | NT_187570.1 |
NT_187571.1 | Chr8|NT_187571.1 | 81 | 81 | Remapped | NT_187571.1 |
NT_187572.1 | Chr8|NT_187572.1 | 45 | 45 | Remapped | NT_187572.1 |
NT_187573.1 | Chr8|NT_187573.1 | 55 | 55 | Remapped | NT_187573.1 |
NT_187574.1 | Chr8|NT_187574.1 | 42 | 42 | Remapped | NT_187574.1 |
NT_187575.1 | Chr8|NT_187575.1 | 3 | 3 | Remapped | NT_187575.1 |
NT_187576.1 | Chr8|NT_187576.1 | 320 | 320 | Remapped | NT_187576.1 |
NT_187577.1 | Chr8|NT_187577.1 | 141 | 141 | Remapped | NT_187577.1 |
NT_187654.1 | Chr8|NT_187654.1 | 68 | 68 | Remapped | NT_187654.1 |
NT_187655.1 | Chr8|NT_187655.1 | 53 | 53 | Remapped | NT_187655.1 |
NW_017852931.1 | Chr8|NW_017852931.1 | 4 | 4 | Remapped | NW_017852931.1 |
NW_017852932.1 | Chr8|NW_017852932.1 | 63 | 63 | Remapped | NW_017852932.1 |
NW_018654716.1 | Chr8|NW_018654716.1 | 24 | 24 | Remapped | NW_018654716.1 |
NW_018654717.1 | Chr8|NW_018654717.1 | 1,543 | 1,543 | Remapped | NW_018654717.1 |
NW_019805494.1 | Chr8|NW_019805494.1 | 5 | 5 | Remapped | NW_019805494.1 |
NT_187578.1 | Chr9|NT_187578.1 | 95 | 95 | Remapped | NT_187578.1 |
NW_003315928.1 | Chr9|NW_003315928.1 | 30 | 30 | Remapped | NW_003315928.1 |
NW_003315929.1 | Chr9|NW_003315929.1 | 4 | 4 | Remapped | NW_003315929.1 |
NW_003315930.1 | Chr9|NW_003315930.1 | 42 | 42 | Remapped | NW_003315930.1 |
NW_003315931.1 | Chr9|NW_003315931.1 | 28 | 28 | Remapped | NW_003315931.1 |
NW_009646201.1 | Chr9|NW_009646201.1 | 99 | 99 | Remapped | NW_009646201.1 |
NW_013171804.1 | Chr9|NW_013171804.1 | 39 | 39 | Remapped | NW_013171804.1 |
NW_013171805.1 | Chr9|NW_013171805.1 | 42 | 42 | Remapped | NW_013171805.1 |
NT_187579.1 | Chr10|NT_187579.1 | 64 | 64 | Remapped | NT_187579.1 |
NT_187580.1 | Chr10|NT_187580.1 | 44 | 44 | Remapped | NT_187580.1 |
NW_003315934.1 | Chr10|NW_003315934.1 | 59 | 59 | Remapped | NW_003315934.1 |
NW_003315935.1 | Chr10|NW_003315935.1 | 88 | 88 | Remapped | NW_003315935.1 |
NW_009646202.1 | Chr10|NW_009646202.1 | 33 | 33 | Remapped | NW_009646202.1 |
NW_011332692.1 | Chr10|NW_011332692.1 | 3 | 3 | Remapped | NW_011332692.1 |
NW_013171806.1 | Chr10|NW_013171806.1 | 63 | 63 | Remapped | NW_013171806.1 |
NW_013171807.1 | Chr10|NW_013171807.1 | 45 | 45 | Remapped | NW_013171807.1 |
NT_187681.1 | Chr11|NT_187681.1 | 74 | 74 | Remapped | NT_187681.1 |
NT_187656.1 | Chr11|NT_187656.1 | 27 | 27 | Remapped | NT_187656.1 |
NT_187657.1 | Chr11|NT_187657.1 | 80 | 80 | Remapped | NT_187657.1 |
NT_187581.1 | Chr11|NT_187581.1 | 55 | 55 | Remapped | NT_187581.1 |
NT_187582.1 | Chr11|NT_187582.1 | 18 | 18 | Remapped | NT_187582.1 |
NT_187583.1 | Chr11|NT_187583.1 | 64 | 64 | Remapped | NT_187583.1 |
NT_187584.1 | Chr11|NT_187584.1 | 73 | 73 | Remapped | NT_187584.1 |
NT_187585.1 | Chr11|NT_187585.1 | 85 | 85 | Remapped | NT_187585.1 |
NT_187586.1 | Chr11|NT_187586.1 | 84 | 84 | Remapped | NT_187586.1 |
NW_003315936.1 | Chr11|NW_003315936.1 | 38 | 38 | Remapped | NW_003315936.1 |
NW_003871073.1 | Chr11|NW_003871073.1 | 61 | 61 | Remapped | NW_003871073.1 |
NW_003871074.1 | Chr11|NW_003871074.1 | 42 | 42 | Remapped | NW_003871074.1 |
NW_009646203.1 | Chr11|NW_009646203.1 | 64 | 64 | Remapped | NW_009646203.1 |
NW_011332695.1 | Chr11|NW_011332695.1 | 64 | 64 | Remapped | NW_011332695.1 |
NW_013171808.1 | Chr11|NW_013171808.1 | 48 | 48 | Remapped | NW_013171808.1 |
NW_015148966.1 | Chr11|NW_015148966.1 | 62 | 62 | Remapped | NW_015148966.1 |
NW_017363816.1 | Chr11|NW_017363816.1 | 49 | 49 | Remapped | NW_017363816.1 |
NW_019805495.1 | Chr11|NW_019805495.1 | 117 | 117 | Remapped | NW_019805495.1 |
NW_019805496.1 | Chr11|NW_019805496.1 | 124 | 124 | Remapped | NW_019805496.1 |
NW_019805497.1 | Chr11|NW_019805497.1 | 104 | 104 | Remapped | NW_019805497.1 |
NW_019805498.1 | Chr11|NW_019805498.1 | 38 | 38 | Remapped | NW_019805498.1 |
NT_187658.1 | Chr12|NT_187658.1 | 192 | 192 | Remapped | NT_187658.1 |
NT_187587.1 | Chr12|NT_187587.1 | 68 | 68 | Remapped | NT_187587.1 |
NT_187588.1 | Chr12|NT_187588.1 | 7 | 7 | Remapped | NT_187588.1 |
NT_187589.1 | Chr12|NT_187589.1 | 26 | 26 | Remapped | NT_187589.1 |
NT_187590.1 | Chr12|NT_187590.1 | 48 | 48 | Remapped | NT_187590.1 |
NT_187591.1 | Chr12|NT_187591.1 | 19 | 19 | Remapped | NT_187591.1 |
NW_003315938.1 | Chr12|NW_003315938.1 | 15 | 15 | Remapped | NW_003315938.1 |
NW_003315939.2 | Chr12|NW_003315939.2 | 60 | 60 | Remapped | NW_003315939.2 |
NW_003315940.1 | Chr12|NW_003315940.1 | 24 | 24 | Remapped | NW_003315940.1 |
NW_003315941.1 | Chr12|NW_003315941.1 | 14 | 14 | Remapped | NW_003315941.1 |
NW_003315942.2 | Chr12|NW_003315942.2 | 24 | 24 | Remapped | NW_003315942.2 |
NW_003571049.1 | Chr12|NW_003571049.1 | 20 | 20 | Remapped | NW_003571049.1 |
NW_003571050.1 | Chr12|NW_003571050.1 | 130 | 130 | Remapped | NW_003571050.1 |
NW_009646204.1 | Chr12|NW_009646204.1 | 87 | 87 | Remapped | NW_009646204.1 |
NW_011332696.1 | Chr12|NW_011332696.1 | 268 | 268 | Remapped | NW_011332696.1 |
NW_011332697.1 | Chr12|NW_011332697.1 | 8 | 8 | Remapped | NW_011332697.1 |
NW_013171809.1 | Chr12|NW_013171809.1 | 64 | 64 | Remapped | NW_013171809.1 |
NW_015148967.1 | Chr12|NW_015148967.1 | 123 | 123 | Remapped | NW_015148967.1 |
NW_018654718.1 | Chr12|NW_018654718.1 | 243 | 243 | Remapped | NW_018654718.1 |
NW_018654719.1 | Chr12|NW_018654719.1 | 11 | 11 | Remapped | NW_018654719.1 |
NW_018654720.1 | Chr12|NW_018654720.1 | 56 | 56 | Remapped | NW_018654720.1 |
NW_019805499.1 | Chr12|NW_019805499.1 | 52 | 52 | Remapped | NW_019805499.1 |
NT_187592.1 | Chr13|NT_187592.1 | 65 | 65 | Remapped | NT_187592.1 |
NT_187593.1 | Chr13|NT_187593.1 | 56 | 56 | Remapped | NT_187593.1 |
NT_187594.1 | Chr13|NT_187594.1 | 47 | 47 | Remapped | NT_187594.1 |
NT_187595.1 | Chr13|NT_187595.1 | 67 | 67 | Remapped | NT_187595.1 |
NT_187597.1 | Chr13|NT_187597.1 | 36 | 36 | Remapped | NT_187597.1 |
NW_009646205.1 | Chr13|NW_009646205.1 | 31 | 31 | Remapped | NW_009646205.1 |
NW_011332698.1 | Chr13|NW_011332698.1 | 70 | 70 | Remapped | NW_011332698.1 |
NW_011332699.1 | Chr13|NW_011332699.1 | 11 | 11 | Remapped | NW_011332699.1 |
NW_011332700.1 | Chr13|NW_011332700.1 | 45 | 45 | Remapped | NW_011332700.1 |
NW_013171810.1 | Chr13|NW_013171810.1 | 53 | 53 | Remapped | NW_013171810.1 |
NW_013171811.1 | Chr13|NW_013171811.1 | 24 | 24 | Remapped | NW_013171811.1 |
NT_113796.3 | Chr14|NT_113796.3 | 5 | 5 | Remapped | NT_113796.3 |
NT_187598.1 | Chr14|NT_187598.1 | 124 | 124 | Remapped | NT_187598.1 |
NT_187599.1 | Chr14|NT_187599.1 | 34 | 34 | Remapped | NT_187599.1 |
NT_187600.1 | Chr14|NT_187600.1 | 381 | 381 | Remapped | NT_187600.1 |
NT_187601.1 | Chr14|NT_187601.1 | 358 | 358 | Remapped | NT_187601.1 |
NW_018654721.1 | Chr14|NW_018654721.1 | 67 | 67 | Remapped | NW_018654721.1 |
NW_018654722.1 | Chr14|NW_018654722.1 | 162 | 162 | Remapped | NW_018654722.1 |
NT_187659.1 | Chr15|NT_187659.1 | 28 | 28 | Remapped | NT_187659.1 |
NT_187660.1 | Chr15|NT_187660.1 | 936 | 936 | Remapped | NT_187660.1 |
NT_187602.1 | Chr15|NT_187602.1 | 7 | 7 | Remapped | NT_187602.1 |
NT_187603.1 | Chr15|NT_187603.1 | 73 | 73 | Remapped | NT_187603.1 |
NT_187604.1 | Chr15|NT_187604.1 | 11 | 11 | Remapped | NT_187604.1 |
NT_187605.1 | Chr15|NT_187605.1 | 47 | 47 | Remapped | NT_187605.1 |
NT_187606.1 | Chr15|NT_187606.1 | 59 | 59 | Remapped | NT_187606.1 |
NW_003315943.1 | Chr15|NW_003315943.1 | 2 | 2 | Remapped | NW_003315943.1 |
NW_003315944.2 | Chr15|NW_003315944.2 | 121 | 121 | Remapped | NW_003315944.2 |
NW_011332701.1 | Chr15|NW_011332701.1 | 955 | 955 | Remapped | NW_011332701.1 |
NW_012132920.1 | Chr15|NW_012132920.1 | 3 | 3 | Remapped | NW_012132920.1 |
NT_187607.1 | Chr16|NT_187607.1 | 589 | 589 | Remapped | NT_187607.1 |
NT_187608.1 | Chr16|NT_187608.1 | 34 | 34 | Remapped | NT_187608.1 |
NT_187609.1 | Chr16|NT_187609.1 | 13 | 13 | Remapped | NT_187609.1 |
NT_187610.1 | Chr16|NT_187610.1 | 41 | 41 | Remapped | NT_187610.1 |
NW_003315945.1 | Chr16|NW_003315945.1 | 25 | 25 | Remapped | NW_003315945.1 |
NW_003315946.1 | Chr16|NW_003315946.1 | 32 | 32 | Remapped | NW_003315946.1 |
NW_012132921.1 | Chr16|NW_012132921.1 | 34 | 34 | Remapped | NW_012132921.1 |
NW_013171812.1 | Chr16|NW_013171812.1 | 19 | 19 | Remapped | NW_013171812.1 |
NW_013171813.1 | Chr16|NW_013171813.1 | 87 | 87 | Remapped | NW_013171813.1 |
NW_017852933.1 | Chr16|NW_017852933.1 | 207 | 207 | Remapped | NW_017852933.1 |
NW_018654723.1 | Chr16|NW_018654723.1 | 28 | 28 | Remapped | NW_018654723.1 |
NW_019805500.1 | Chr16|NW_019805500.1 | 152 | 152 | Remapped | NW_019805500.1 |
NT_187661.1 | Chr17|NT_187661.1 | 36 | 36 | Remapped | NT_187661.1 |
NT_187662.1 | Chr17|NT_187662.1 | 53 | 53 | Remapped | NT_187662.1 |
NT_187663.1 | Chr17|NT_187663.1 | 265 | 265 | Remapped | NT_187663.1 |
NT_187664.1 | Chr17|NT_187664.1 | 60 | 60 | Remapped | NT_187664.1 |
NW_003871093.1 | Chr17|NW_003871093.1 | 28 | 28 | Remapped | NW_003871093.1 |
NT_167251.2 | Chr17|NT_167251.2 | 212 | 212 | Remapped | NT_167251.2 |
NT_187611.1 | Chr17|NT_187611.1 | 83 | 83 | Remapped | NT_187611.1 |
NT_187612.1 | Chr17|NT_187612.1 | 50 | 50 | Remapped | NT_187612.1 |
NT_187613.1 | Chr17|NT_187613.1 | 230 | 230 | Remapped | NT_187613.1 |
NT_187614.1 | Chr17|NT_187614.1 | 858 | 858 | Remapped | NT_187614.1 |
NT_187615.1 | Chr17|NT_187615.1 | 22 | 22 | Remapped | NT_187615.1 |
NT_187616.1 | Chr17|NT_187616.1 | 49 | 49 | Remapped | NT_187616.1 |
NW_003315952.3 | Chr17|NW_003315952.3 | 104 | 104 | Remapped | NW_003315952.3 |
NW_003315953.2 | Chr17|NW_003315953.2 | 12 | 12 | Remapped | NW_003315953.2 |
NW_003315954.1 | Chr17|NW_003315954.1 | 47 | 47 | Remapped | NW_003315954.1 |
NW_003315955.1 | Chr17|NW_003315955.1 | 26 | 26 | Remapped | NW_003315955.1 |
NW_003871091.1 | Chr17|NW_003871091.1 | 36 | 36 | Remapped | NW_003871091.1 |
NW_003871092.1 | Chr17|NW_003871092.1 | 26 | 26 | Remapped | NW_003871092.1 |
NW_016107299.1 | Chr17|NW_016107299.1 | 95 | 95 | Remapped | NW_016107299.1 |
NW_017363817.1 | Chr17|NW_017363817.1 | 133 | 133 | Remapped | NW_017363817.1 |
NW_017363818.1 | Chr17|NW_017363818.1 | 46 | 46 | Remapped | NW_017363818.1 |
NW_017363819.1 | Chr17|NW_017363819.1 | 47 | 47 | Remapped | NW_017363819.1 |
NW_019805501.1 | Chr17|NW_019805501.1 | 49 | 49 | Remapped | NW_019805501.1 |
NT_187665.1 | Chr18|NT_187665.1 | 55 | 55 | Remapped | NT_187665.1 |
NT_187666.1 | Chr18|NT_187666.1 | 43 | 43 | Remapped | NT_187666.1 |
NT_187617.1 | Chr18|NT_187617.1 | 57 | 57 | Remapped | NT_187617.1 |
NT_187618.1 | Chr18|NT_187618.1 | 65 | 65 | Remapped | NT_187618.1 |
NW_003315956.1 | Chr18|NW_003315956.1 | 75 | 75 | Remapped | NW_003315956.1 |
NW_003315957.1 | Chr18|NW_003315957.1 | 36 | 36 | Remapped | NW_003315957.1 |
NW_003315958.1 | Chr18|NW_003315958.1 | 49 | 49 | Remapped | NW_003315958.1 |
NW_003315959.1 | Chr18|NW_003315959.1 | 35 | 35 | Remapped | NW_003315959.1 |
NW_003315960.1 | Chr18|NW_003315960.1 | 49 | 49 | Remapped | NW_003315960.1 |
NW_003315961.1 | Chr18|NW_003315961.1 | 44 | 44 | Remapped | NW_003315961.1 |
NW_013171814.1 | Chr18|NW_013171814.1 | 93 | 93 | Remapped | NW_013171814.1 |
NW_014040928.1 | Chr18|NW_014040928.1 | 44 | 44 | Remapped | NW_014040928.1 |
NW_018654724.1 | Chr18|NW_018654724.1 | 22 | 22 | Remapped | NW_018654724.1 |
NW_019805502.1 | Chr18|NW_019805502.1 | 41 | 41 | Remapped | NW_019805502.1 |
NW_019805503.1 | Chr18|NW_019805503.1 | 33 | 33 | Remapped | NW_019805503.1 |
NT_187674.1 | Chr19|NT_187674.1 | 2 | 2 | Remapped | NT_187674.1 |
NT_187675.1 | Chr19|NT_187675.1 | 1 | 1 | Remapped | NT_187675.1 |
NT_187677.1 | Chr19|NT_187677.1 | 1 | 1 | Remapped | NT_187677.1 |
NT_187693.1 | Chr19|NT_187693.1 | 421 | 421 | Remapped | NT_187693.1 |
NW_003571061.2 | Chr19|NW_003571061.2 | 287 | 287 | Remapped | NW_003571061.2 |
NW_003571057.2 | Chr19|NW_003571057.2 | 212 | 212 | Remapped | NW_003571057.2 |
NW_003571058.2 | Chr19|NW_003571058.2 | 212 | 212 | Remapped | NW_003571058.2 |
NW_003571059.2 | Chr19|NW_003571059.2 | 212 | 212 | Remapped | NW_003571059.2 |
NW_003571060.1 | Chr19|NW_003571060.1 | 337 | 337 | Remapped | NW_003571060.1 |
NW_003571056.2 | Chr19|NW_003571056.2 | 212 | 212 | Remapped | NW_003571056.2 |
NW_003571055.2 | Chr19|NW_003571055.2 | 247 | 247 | Remapped | NW_003571055.2 |
NT_187619.1 | Chr19|NT_187619.1 | 7 | 7 | Remapped | NT_187619.1 |
NT_187620.1 | Chr19|NT_187620.1 | 35 | 35 | Remapped | NT_187620.1 |
NT_187621.1 | Chr19|NT_187621.1 | 4 | 4 | Remapped | NT_187621.1 |
NT_187622.1 | Chr19|NT_187622.1 | 22 | 22 | Remapped | NT_187622.1 |
NW_003315962.1 | Chr19|NW_003315962.1 | 180 | 180 | Remapped | NW_003315962.1 |
NW_003315963.1 | Chr19|NW_003315963.1 | 66 | 66 | Remapped | NW_003315963.1 |
NW_003315964.2 | Chr19|NW_003315964.2 | 103 | 103 | Remapped | NW_003315964.2 |
NW_003315965.1 | Chr19|NW_003315965.1 | 39 | 39 | Remapped | NW_003315965.1 |
NW_003571054.1 | Chr19|NW_003571054.1 | 343 | 343 | Remapped | NW_003571054.1 |
NW_009646206.1 | Chr19|NW_009646206.1 | 82 | 82 | Remapped | NW_009646206.1 |
NW_014040929.1 | Chr19|NW_014040929.1 | 169 | 169 | Remapped | NW_014040929.1 |
NT_187623.1 | Chr20|NT_187623.1 | 43 | 43 | Remapped | NT_187623.1 |
NT_187624.1 | Chr20|NT_187624.1 | 74 | 74 | Remapped | NT_187624.1 |
NT_187625.1 | Chr20|NT_187625.1 | 8 | 8 | Remapped | NT_187625.1 |
NW_003315966.2 | Chr20|NW_003315966.2 | 41 | 41 | Remapped | NW_003315966.2 |
NT_187626.1 | Chr21|NT_187626.1 | 26 | 26 | Remapped | NT_187626.1 |
NT_187627.1 | Chr21|NT_187627.1 | 76 | 76 | Remapped | NT_187627.1 |
NT_187628.1 | Chr21|NT_187628.1 | 58 | 58 | Remapped | NT_187628.1 |
NW_003315967.2 | Chr21|NW_003315967.2 | 11 | 11 | Remapped | NW_003315967.2 |
NW_003315968.2 | Chr21|NW_003315968.2 | 64 | 64 | Remapped | NW_003315968.2 |
NW_003315969.2 | Chr21|NW_003315969.2 | 23 | 23 | Remapped | NW_003315969.2 |
NW_003315970.2 | Chr21|NW_003315970.2 | 61 | 61 | Remapped | NW_003315970.2 |
NT_187682.1 | Chr22|NT_187682.1 | 16 | 16 | Remapped | NT_187682.1 |
NW_004504305.1 | Chr22|NW_004504305.1 | 2 | 2 | Remapped | NW_004504305.1 |
NW_009646207.1 | Chr22|NW_009646207.1 | 2 | 2 | Remapped | NW_009646207.1 |
NW_015148969.1 | Chr22|NW_015148969.1 | 24 | 24 | Remapped | NW_015148969.1 |
NT_187387.1 | Chr22|NT_187387.1 | 1 | 1 | Remapped | NT_187387.1 |
NT_187629.1 | Chr22|NT_187629.1 | 106 | 106 | Remapped | NT_187629.1 |
NT_187630.1 | Chr22|NT_187630.1 | 60 | 60 | Remapped | NT_187630.1 |
NT_187631.1 | Chr22|NT_187631.1 | 41 | 41 | Remapped | NT_187631.1 |
NT_187632.1 | Chr22|NT_187632.1 | 87 | 87 | Remapped | NT_187632.1 |
NT_187633.1 | Chr22|NT_187633.1 | 102 | 102 | Remapped | NT_187633.1 |
NW_003315971.2 | Chr22|NW_003315971.2 | 2 | 2 | Remapped | NW_003315971.2 |
NW_003315972.2 | Chr22|NW_003315972.2 | 31 | 31 | Remapped | NW_003315972.2 |
NW_017363820.1 | ChrX|NW_017363820.1 | 53 | 53 | Remapped | NW_017363820.1 |
NT_187635.1 | ChrX|NT_187635.1 | 4 | 4 | Remapped | NT_187635.1 |
NW_009646209.1 | ChrY|NW_009646209.1 | 2 | 2 | Remapped | NW_009646209.1 |
NW_018654726.1 | ChrY|NW_018654726.1 | 3 | 3 | Remapped | NW_018654726.1 |
Sequence ID | Chr | Number of Variant Regions | Number of Variant Calls | Placement type | Link to graphical display |
---|---|---|---|---|---|
NC_000001.10 | Chr1 | 60,823 | 60,823 | Remapped | NC_000001.10 |
NC_000002.11 | Chr2 | 64,822 | 64,822 | Remapped | NC_000002.11 |
NC_000003.11 | Chr3 | 50,125 | 50,125 | Remapped | NC_000003.11 |
NC_000004.11 | Chr4 | 56,372 | 56,372 | Remapped | NC_000004.11 |
NC_000005.9 | Chr5 | 46,906 | 46,906 | Remapped | NC_000005.9 |
NC_000006.11 | Chr6 | 46,539 | 46,539 | Remapped | NC_000006.11 |
NC_000007.13 | Chr7 | 44,977 | 44,977 | Remapped | NC_000007.13 |
NC_000008.10 | Chr8 | 38,240 | 38,240 | Remapped | NC_000008.10 |
NC_000009.11 | Chr9 | 30,068 | 30,068 | Remapped | NC_000009.11 |
NC_000010.10 | Chr10 | 39,193 | 39,193 | Remapped | NC_000010.10 |
NC_000011.9 | Chr11 | 36,949 | 36,949 | Remapped | NC_000011.9 |
NC_000012.11 | Chr12 | 38,242 | 38,242 | Remapped | NC_000012.11 |
NC_000013.10 | Chr13 | 29,526 | 29,526 | Remapped | NC_000013.10 |
NC_000014.8 | Chr14 | 25,313 | 25,313 | Remapped | NC_000014.8 |
NC_000015.9 | Chr15 | 23,568 | 23,568 | Remapped | NC_000015.9 |
NC_000016.9 | Chr16 | 23,344 | 23,344 | Remapped | NC_000016.9 |
NC_000017.10 | Chr17 | 24,688 | 24,688 | Remapped | NC_000017.10 |
NC_000018.9 | Chr18 | 22,021 | 22,021 | Remapped | NC_000018.9 |
NC_000019.9 | Chr19 | 20,549 | 20,549 | Remapped | NC_000019.9 |
NC_000020.10 | Chr20 | 16,747 | 16,747 | Remapped | NC_000020.10 |
NC_000021.8 | Chr21 | 11,407 | 11,407 | Remapped | NC_000021.8 |
NC_000022.10 | Chr22 | 10,785 | 10,785 | Remapped | NC_000022.10 |
NC_000023.10 | ChrX | 17,466 | 17,466 | Remapped | NC_000023.10 |
NC_000024.9 | ChrY | 944 | 944 | Remapped | NC_000024.9 |
NW_003315904.1 | Chr1|NW_003315904.1 | 10 | 10 | Remapped | NW_003315904.1 |
NW_003315905.1 | Chr1|NW_003315905.1 | 57 | 57 | Remapped | NW_003315905.1 |
NW_003315906.1 | Chr1|NW_003315906.1 | 26 | 26 | Remapped | NW_003315906.1 |
NW_003315907.1 | Chr1|NW_003315907.1 | 74 | 74 | Remapped | NW_003315907.1 |
NW_003571030.1 | Chr1|NW_003571030.1 | 48 | 48 | Remapped | NW_003571030.1 |
NW_003871055.3 | Chr1|NW_003871055.3 | 678 | 678 | Remapped | NW_003871055.3 |
NW_003871056.3 | Chr1|NW_003871056.3 | 60 | 60 | Remapped | NW_003871056.3 |
NW_003871057.1 | Chr1|NW_003871057.1 | 184 | 184 | Remapped | NW_003871057.1 |
NW_004070864.2 | Chr1|NW_004070864.2 | 5 | 5 | Remapped | NW_004070864.2 |
NW_004070865.1 | Chr1|NW_004070865.1 | 18 | 18 | Remapped | NW_004070865.1 |
NW_003315908.1 | Chr2|NW_003315908.1 | 21 | 21 | Remapped | NW_003315908.1 |
NW_003315909.1 | Chr2|NW_003315909.1 | 52 | 52 | Remapped | NW_003315909.1 |
NW_003571032.1 | Chr2|NW_003571032.1 | 46 | 46 | Remapped | NW_003571032.1 |
NW_003571033.2 | Chr2|NW_003571033.2 | 4 | 4 | Remapped | NW_003571033.2 |
NW_004504299.1 | Chr2|NW_004504299.1 | 197 | 197 | Remapped | NW_004504299.1 |
NW_003315910.1 | Chr3|NW_003315910.1 | 31 | 31 | Remapped | NW_003315910.1 |
NW_003315911.1 | Chr3|NW_003315911.1 | 15 | 15 | Remapped | NW_003315911.1 |
NW_003315912.1 | Chr3|NW_003315912.1 | 11 | 11 | Remapped | NW_003315912.1 |
NW_003315913.1 | Chr3|NW_003315913.1 | 39 | 39 | Remapped | NW_003315913.1 |
NW_003871058.1 | Chr3|NW_003871058.1 | 119 | 119 | Remapped | NW_003871058.1 |
NW_003871059.1 | Chr3|NW_003871059.1 | 13 | 13 | Remapped | NW_003871059.1 |
NW_003871060.1 | Chr3|NW_003871060.1 | 44 | 44 | Remapped | NW_003871060.1 |
NW_004775426.1 | Chr3|NW_004775426.1 | 84 | 84 | Remapped | NW_004775426.1 |
NT_167250.1 | Chr4|NT_167250.1 | 91 | 91 | Remapped | NT_167250.1 |
NW_003315914.1 | Chr4|NW_003315914.1 | 67 | 67 | Remapped | NW_003315914.1 |
NW_003315915.1 | Chr4|NW_003315915.1 | 88 | 88 | Remapped | NW_003315915.1 |
NW_003315916.1 | Chr4|NW_003315916.1 | 19 | 19 | Remapped | NW_003315916.1 |
NW_003571034.1 | Chr4|NW_003571034.1 | 39 | 39 | Remapped | NW_003571034.1 |
NW_003571035.1 | Chr4|NW_003571035.1 | 73 | 73 | Remapped | NW_003571035.1 |
NW_004775427.1 | Chr4|NW_004775427.1 | 99 | 99 | Remapped | NW_004775427.1 |
NW_003315918.1 | Chr5|NW_003315918.1 | 13 | 13 | Remapped | NW_003315918.1 |
NW_003315919.1 | Chr5|NW_003315919.1 | 53 | 53 | Remapped | NW_003315919.1 |
NW_003315920.1 | Chr5|NW_003315920.1 | 9 | 9 | Remapped | NW_003315920.1 |
NW_003571036.1 | Chr5|NW_003571036.1 | 79 | 79 | Remapped | NW_003571036.1 |
NW_003871061.1 | Chr5|NW_003871061.1 | 41 | 41 | Remapped | NW_003871061.1 |
NW_004775428.1 | Chr5|NW_004775428.1 | 143 | 143 | Remapped | NW_004775428.1 |
NT_113891.2 | Chr6|NT_113891.2 | 10 | 10 | Remapped | NT_113891.2 |
NT_167244.1 | Chr6|NT_167244.1 | 269 | 269 | Remapped | NT_167244.1 |
NT_167245.1 | Chr6|NT_167245.1 | 777 | 777 | Remapped | NT_167245.1 |
NT_167246.1 | Chr6|NT_167246.1 | 1,134 | 1,134 | Remapped | NT_167246.1 |
NT_167247.1 | Chr6|NT_167247.1 | 822 | 822 | Remapped | NT_167247.1 |
NT_167248.1 | Chr6|NT_167248.1 | 67 | 67 | Remapped | NT_167248.1 |
NT_167249.1 | Chr6|NT_167249.1 | 650 | 650 | Remapped | NT_167249.1 |
NW_003315921.1 | Chr6|NW_003315921.1 | 26 | 26 | Remapped | NW_003315921.1 |
NW_003871062.1 | Chr6|NW_003871062.1 | 74 | 74 | Remapped | NW_003871062.1 |
NW_004070866.1 | Chr6|NW_004070866.1 | 78 | 78 | Remapped | NW_004070866.1 |
NW_004166862.1 | Chr6|NW_004166862.1 | 88 | 88 | Remapped | NW_004166862.1 |
NW_004504300.1 | Chr6|NW_004504300.1 | 164 | 164 | Remapped | NW_004504300.1 |
NW_003315922.2 | Chr7|NW_003315922.2 | 36 | 36 | Remapped | NW_003315922.2 |
NW_003571037.1 | Chr7|NW_003571037.1 | 92 | 92 | Remapped | NW_003571037.1 |
NW_003571038.1 | Chr7|NW_003571038.1 | 153 | 153 | Remapped | NW_003571038.1 |
NW_003571039.1 | Chr7|NW_003571039.1 | 46 | 46 | Remapped | NW_003571039.1 |
NW_003571040.1 | Chr7|NW_003571040.1 | 382 | 382 | Remapped | NW_003571040.1 |
NW_003571041.1 | Chr7|NW_003571041.1 | 148 | 148 | Remapped | NW_003571041.1 |
NW_003871064.1 | Chr7|NW_003871064.1 | 1,025 | 1,025 | Remapped | NW_003871064.1 |
NW_003871065.1 | Chr7|NW_003871065.1 | 199 | 199 | Remapped | NW_003871065.1 |
NW_004775430.1 | Chr7|NW_004775430.1 | 39 | 39 | Remapped | NW_004775430.1 |
NW_003315923.1 | Chr8|NW_003315923.1 | 86 | 86 | Remapped | NW_003315923.1 |
NW_003315924.1 | Chr8|NW_003315924.1 | 27 | 27 | Remapped | NW_003315924.1 |
NW_003571042.1 | Chr8|NW_003571042.1 | 177 | 177 | Remapped | NW_003571042.1 |
NW_003871066.2 | Chr8|NW_003871066.2 | 39 | 39 | Remapped | NW_003871066.2 |
NW_004775431.1 | Chr8|NW_004775431.1 | 46 | 46 | Remapped | NW_004775431.1 |
NW_003315925.1 | Chr9|NW_003315925.1 | 98 | 98 | Remapped | NW_003315925.1 |
NW_003315926.1 | Chr9|NW_003315926.1 | 7 | 7 | Remapped | NW_003315926.1 |
NW_003315927.1 | Chr9|NW_003315927.1 | 14 | 14 | Remapped | NW_003315927.1 |
NW_003315928.1 | Chr9|NW_003315928.1 | 30 | 30 | Remapped | NW_003315928.1 |
NW_003315929.1 | Chr9|NW_003315929.1 | 4 | 4 | Remapped | NW_003315929.1 |
NW_003315930.1 | Chr9|NW_003315930.1 | 42 | 42 | Remapped | NW_003315930.1 |
NW_003315931.1 | Chr9|NW_003315931.1 | 28 | 28 | Remapped | NW_003315931.1 |
NW_003871067.1 | Chr9|NW_003871067.1 | 35 | 35 | Remapped | NW_003871067.1 |
NW_004070867.1 | Chr9|NW_004070867.1 | 8 | 8 | Remapped | NW_004070867.1 |
NW_004070868.1 | Chr9|NW_004070868.1 | 36 | 36 | Remapped | NW_004070868.1 |
NW_004070869.1 | Chr9|NW_004070869.1 | 80 | 80 | Remapped | NW_004070869.1 |
NW_004504301.1 | Chr9|NW_004504301.1 | 26 | 26 | Remapped | NW_004504301.1 |
NW_003315932.1 | Chr10|NW_003315932.1 | 79 | 79 | Remapped | NW_003315932.1 |
NW_003315933.1 | Chr10|NW_003315933.1 | 36 | 36 | Remapped | NW_003315933.1 |
NW_003315934.1 | Chr10|NW_003315934.1 | 50 | 50 | Remapped | NW_003315934.1 |
NW_003315935.1 | Chr10|NW_003315935.1 | 88 | 88 | Remapped | NW_003315935.1 |
NW_003571043.1 | Chr10|NW_003571043.1 | 44 | 44 | Remapped | NW_003571043.1 |
NW_003871068.1 | Chr10|NW_003871068.1 | 217 | 217 | Remapped | NW_003871068.1 |
NW_003871069.1 | Chr10|NW_003871069.1 | 80 | 80 | Remapped | NW_003871069.1 |
NW_003871070.1 | Chr10|NW_003871070.1 | 67 | 67 | Remapped | NW_003871070.1 |
NW_003871071.1 | Chr10|NW_003871071.1 | 158 | 158 | Remapped | NW_003871071.1 |
NW_004070870.1 | Chr10|NW_004070870.1 | 22 | 22 | Remapped | NW_004070870.1 |
NW_004504302.1 | Chr10|NW_004504302.1 | 47 | 47 | Remapped | NW_004504302.1 |
NW_004775432.1 | Chr10|NW_004775432.1 | 305 | 305 | Remapped | NW_004775432.1 |
NW_003315936.1 | Chr11|NW_003315936.1 | 37 | 37 | Remapped | NW_003315936.1 |
NW_003571045.1 | Chr11|NW_003571045.1 | 135 | 135 | Remapped | NW_003571045.1 |
NW_003571046.1 | Chr11|NW_003571046.1 | 49 | 49 | Remapped | NW_003571046.1 |
NW_003871072.2 | Chr11|NW_003871072.2 | 131 | 131 | Remapped | NW_003871072.2 |
NW_003871073.1 | Chr11|NW_003871073.1 | 61 | 61 | Remapped | NW_003871073.1 |
NW_003871074.1 | Chr11|NW_003871074.1 | 42 | 42 | Remapped | NW_003871074.1 |
NW_003871075.1 | Chr11|NW_003871075.1 | 140 | 140 | Remapped | NW_003871075.1 |
NW_003871076.1 | Chr11|NW_003871076.1 | 63 | 63 | Remapped | NW_003871076.1 |
NW_003871077.1 | Chr11|NW_003871077.1 | 33 | 33 | Remapped | NW_003871077.1 |
NW_003871078.1 | Chr11|NW_003871078.1 | 82 | 82 | Remapped | NW_003871078.1 |
NW_003871079.1 | Chr11|NW_003871079.1 | 80 | 80 | Remapped | NW_003871079.1 |
NW_003871080.1 | Chr11|NW_003871080.1 | 96 | 96 | Remapped | NW_003871080.1 |
NW_003871081.1 | Chr11|NW_003871081.1 | 63 | 63 | Remapped | NW_003871081.1 |
NW_003871082.1 | Chr11|NW_003871082.1 | 28 | 28 | Remapped | NW_003871082.1 |
NW_004070871.1 | Chr11|NW_004070871.1 | 231 | 231 | Remapped | NW_004070871.1 |
NW_003315937.1 | Chr12|NW_003315937.1 | 38 | 38 | Remapped | NW_003315937.1 |
NW_003315938.1 | Chr12|NW_003315938.1 | 15 | 15 | Remapped | NW_003315938.1 |
NW_003315939.1 | Chr12|NW_003315939.1 | 60 | 60 | Remapped | NW_003315939.1 |
NW_003315940.1 | Chr12|NW_003315940.1 | 24 | 24 | Remapped | NW_003315940.1 |
NW_003315941.1 | Chr12|NW_003315941.1 | 14 | 14 | Remapped | NW_003315941.1 |
NW_003315942.2 | Chr12|NW_003315942.2 | 24 | 24 | Remapped | NW_003315942.2 |
NW_003571048.1 | Chr12|NW_003571048.1 | 19 | 19 | Remapped | NW_003571048.1 |
NW_003571049.1 | Chr12|NW_003571049.1 | 1 | 1 | Remapped | NW_003571049.1 |
NW_003571050.1 | Chr12|NW_003571050.1 | 4 | 4 | Remapped | NW_003571050.1 |
NW_003871083.2 | Chr12|NW_003871083.2 | 80 | 80 | Remapped | NW_003871083.2 |
NW_004504303.2 | Chr12|NW_004504303.2 | 77 | 77 | Remapped | NW_004504303.2 |
NW_003571051.1 | Chr13|NW_003571051.1 | 3 | 3 | Remapped | NW_003571051.1 |
NW_004166863.1 | Chr14|NW_004166863.1 | 442 | 442 | Remapped | NW_004166863.1 |
NW_003315943.1 | Chr15|NW_003315943.1 | 2 | 2 | Remapped | NW_003315943.1 |
NW_003315944.1 | Chr15|NW_003315944.1 | 120 | 120 | Remapped | NW_003315944.1 |
NW_003871084.1 | Chr15|NW_003871084.1 | 60 | 60 | Remapped | NW_003871084.1 |
NW_003315945.1 | Chr16|NW_003315945.1 | 25 | 25 | Remapped | NW_003315945.1 |
NW_003315946.1 | Chr16|NW_003315946.1 | 32 | 32 | Remapped | NW_003315946.1 |
NW_003871085.1 | Chr16|NW_003871085.1 | 27 | 27 | Remapped | NW_003871085.1 |
NT_167251.1 | Chr17|NT_167251.1 | 190 | 190 | Remapped | NT_167251.1 |
NW_003315947.1 | Chr17|NW_003315947.1 | 112 | 112 | Remapped | NW_003315947.1 |
NW_003315948.2 | Chr17|NW_003315948.2 | 105 | 105 | Remapped | NW_003315948.2 |
NW_003315949.1 | Chr17|NW_003315949.1 | 98 | 98 | Remapped | NW_003315949.1 |
NW_003315950.2 | Chr17|NW_003315950.2 | 48 | 48 | Remapped | NW_003315950.2 |
NW_003315951.1 | Chr17|NW_003315951.1 | 26 | 26 | Remapped | NW_003315951.1 |
NW_003315953.1 | Chr17|NW_003315953.1 | 12 | 12 | Remapped | NW_003315953.1 |
NW_003315954.1 | Chr17|NW_003315954.1 | 47 | 47 | Remapped | NW_003315954.1 |
NW_003315955.1 | Chr17|NW_003315955.1 | 26 | 26 | Remapped | NW_003315955.1 |
NW_003571052.1 | Chr17|NW_003571052.1 | 159 | 159 | Remapped | NW_003571052.1 |
NW_003871086.1 | Chr17|NW_003871086.1 | 39 | 39 | Remapped | NW_003871086.1 |
NW_003871087.1 | Chr17|NW_003871087.1 | 86 | 86 | Remapped | NW_003871087.1 |
NW_003871088.1 | Chr17|NW_003871088.1 | 148 | 148 | Remapped | NW_003871088.1 |
NW_003871089.1 | Chr17|NW_003871089.1 | 55 | 55 | Remapped | NW_003871089.1 |
NW_003871090.1 | Chr17|NW_003871090.1 | 45 | 45 | Remapped | NW_003871090.1 |
NW_003871091.1 | Chr17|NW_003871091.1 | 36 | 36 | Remapped | NW_003871091.1 |
NW_003871093.1 | Chr17|NW_003871093.1 | 4 | 4 | Remapped | NW_003871093.1 |
NW_004070872.2 | Chr17|NW_004070872.2 | 131 | 131 | Remapped | NW_004070872.2 |
NW_004166864.2 | Chr17|NW_004166864.2 | 19 | 19 | Remapped | NW_004166864.2 |
NW_004775433.1 | Chr17|NW_004775433.1 | 17 | 17 | Remapped | NW_004775433.1 |
NW_003315956.1 | Chr18|NW_003315956.1 | 75 | 75 | Remapped | NW_003315956.1 |
NW_003315957.1 | Chr18|NW_003315957.1 | 35 | 35 | Remapped | NW_003315957.1 |
NW_003315958.1 | Chr18|NW_003315958.1 | 49 | 49 | Remapped | NW_003315958.1 |
NW_003315959.1 | Chr18|NW_003315959.1 | 35 | 35 | Remapped | NW_003315959.1 |
NW_003315960.1 | Chr18|NW_003315960.1 | 49 | 49 | Remapped | NW_003315960.1 |
NW_003315961.1 | Chr18|NW_003315961.1 | 41 | 41 | Remapped | NW_003315961.1 |
NW_003315962.1 | Chr19|NW_003315962.1 | 180 | 180 | Remapped | NW_003315962.1 |
NW_003315963.1 | Chr19|NW_003315963.1 | 66 | 66 | Remapped | NW_003315963.1 |
NW_003315964.2 | Chr19|NW_003315964.2 | 103 | 103 | Remapped | NW_003315964.2 |
NW_003315965.1 | Chr19|NW_003315965.1 | 40 | 40 | Remapped | NW_003315965.1 |
NW_003571053.2 | Chr19|NW_003571053.2 | 231 | 231 | Remapped | NW_003571053.2 |
NW_003571054.1 | Chr19|NW_003571054.1 | 1 | 1 | Remapped | NW_003571054.1 |
NW_003571055.1 | Chr19|NW_003571055.1 | 1 | 1 | Remapped | NW_003571055.1 |
NW_003571056.1 | Chr19|NW_003571056.1 | 1 | 1 | Remapped | NW_003571056.1 |
NW_003571057.1 | Chr19|NW_003571057.1 | 1 | 1 | Remapped | NW_003571057.1 |
NW_003571058.1 | Chr19|NW_003571058.1 | 1 | 1 | Remapped | NW_003571058.1 |
NW_003571059.1 | Chr19|NW_003571059.1 | 1 | 1 | Remapped | NW_003571059.1 |
NW_003571060.1 | Chr19|NW_003571060.1 | 42 | 42 | Remapped | NW_003571060.1 |
NW_003571061.1 | Chr19|NW_003571061.1 | 41 | 41 | Remapped | NW_003571061.1 |
NW_003871094.1 | Chr19|NW_003871094.1 | 77 | 77 | Remapped | NW_003871094.1 |
NW_004166865.1 | Chr19|NW_004166865.1 | 186 | 186 | Remapped | NW_004166865.1 |
NW_004775434.1 | Chr19|NW_004775434.1 | 150 | 150 | Remapped | NW_004775434.1 |
NW_003315966.1 | Chr20|NW_003315966.1 | 41 | 41 | Remapped | NW_003315966.1 |
NW_003571063.2 | Chr20|NW_003571063.2 | 20 | 20 | Remapped | NW_003571063.2 |
NW_003871095.1 | Chr20|NW_003871095.1 | 2 | 2 | Remapped | NW_003871095.1 |
NW_004504304.1 | Chr20|NW_004504304.1 | 72 | 72 | Remapped | NW_004504304.1 |
NW_003315967.1 | Chr21|NW_003315967.1 | 10 | 10 | Remapped | NW_003315967.1 |
NW_003315968.1 | Chr21|NW_003315968.1 | 64 | 64 | Remapped | NW_003315968.1 |
NW_003315969.1 | Chr21|NW_003315969.1 | 23 | 23 | Remapped | NW_003315969.1 |
NW_003315970.1 | Chr21|NW_003315970.1 | 60 | 60 | Remapped | NW_003315970.1 |
NW_004775435.1 | Chr21|NW_004775435.1 | 111 | 111 | Remapped | NW_004775435.1 |
NW_003315971.2 | Chr22|NW_003315971.2 | 17 | 17 | Remapped | NW_003315971.2 |
NW_003315972.1 | Chr22|NW_003315972.1 | 31 | 31 | Remapped | NW_003315972.1 |
NW_003871096.1 | Chr22|NW_003871096.1 | 49 | 49 | Remapped | NW_003871096.1 |
NW_004070873.1 | Chr22|NW_004070873.1 | 26 | 26 | Remapped | NW_004070873.1 |
NW_004070874.1 | Chr22|NW_004070874.1 | 1 | 1 | Remapped | NW_004070874.1 |
NW_004070875.1 | Chr22|NW_004070875.1 | 21 | 21 | Remapped | NW_004070875.1 |
NW_004504305.1 | Chr22|NW_004504305.1 | 2 | 2 | Remapped | NW_004504305.1 |
NW_003871098.1 | ChrX|NW_003871098.1 | 31 | 31 | Remapped | NW_003871098.1 |
NW_003871099.1 | ChrX|NW_003871099.1 | 13 | 13 | Remapped | NW_003871099.1 |
NW_003871100.1 | ChrX|NW_003871100.1 | 96 | 96 | Remapped | NW_003871100.1 |
NW_003871101.3 | ChrX|NW_003871101.3 | 25 | 25 | Remapped | NW_003871101.3 |
NW_003871102.1 | ChrX|NW_003871102.1 | 11 | 11 | Remapped | NW_003871102.1 |
NW_003871103.3 | ChrX|NW_003871103.3 | 310 | 310 | Remapped | NW_003871103.3 |
NW_004070877.1 | ChrX|NW_004070877.1 | 427 | 427 | Remapped | NW_004070877.1 |
NW_004070878.1 | ChrX|NW_004070878.1 | 67 | 67 | Remapped | NW_004070878.1 |
NW_004070879.1 | ChrX|NW_004070879.1 | 34 | 34 | Remapped | NW_004070879.1 |
NW_004070880.2 | ChrX|NW_004070880.2 | 238 | 238 | Remapped | NW_004070880.2 |
NW_004070881.1 | ChrX|NW_004070881.1 | 28 | 28 | Remapped | NW_004070881.1 |
NW_004070882.1 | ChrX|NW_004070882.1 | 43 | 43 | Remapped | NW_004070882.1 |
NW_004070883.1 | ChrX|NW_004070883.1 | 51 | 51 | Remapped | NW_004070883.1 |
NW_004070884.1 | ChrX|NW_004070884.1 | 29 | 29 | Remapped | NW_004070884.1 |
NW_004070885.1 | ChrX|NW_004070885.1 | 62 | 62 | Remapped | NW_004070885.1 |
NW_004070886.1 | ChrX|NW_004070886.1 | 51 | 51 | Remapped | NW_004070886.1 |
NW_004070887.1 | ChrX|NW_004070887.1 | 105 | 105 | Remapped | NW_004070887.1 |
NW_004070888.1 | ChrX|NW_004070888.1 | 115 | 115 | Remapped | NW_004070888.1 |
NW_004070889.1 | ChrX|NW_004070889.1 | 138 | 138 | Remapped | NW_004070889.1 |
NW_004070890.2 | ChrX|NW_004070890.2 | 795 | 795 | Remapped | NW_004070890.2 |
NW_004070891.1 | ChrX|NW_004070891.1 | 212 | 212 | Remapped | NW_004070891.1 |
NW_004070892.1 | ChrX|NW_004070892.1 | 94 | 94 | Remapped | NW_004070892.1 |
NW_004070893.1 | ChrX|NW_004070893.1 | 22 | 22 | Remapped | NW_004070893.1 |
NW_004166866.1 | ChrX|NW_004166866.1 | 58 | 58 | Remapped | NW_004166866.1 |
Sequence ID | Chr | Number of Variant Regions | Number of Variant Calls | Placement type | Link to graphical display |
---|---|---|---|---|---|
NC_000001.9 | Chr1 | 60,825 | 60,825 | Submitted | NC_000001.9 |
NC_000002.10 | Chr2 | 64,827 | 64,827 | Submitted | NC_000002.10 |
NC_000003.10 | Chr3 | 50,129 | 50,129 | Submitted | NC_000003.10 |
NC_000004.10 | Chr4 | 56,414 | 56,414 | Submitted | NC_000004.10 |
NC_000005.8 | Chr5 | 46,912 | 46,912 | Submitted | NC_000005.8 |
NC_000006.10 | Chr6 | 46,541 | 46,541 | Submitted | NC_000006.10 |
NC_000007.12 | Chr7 | 45,121 | 45,121 | Submitted | NC_000007.12 |
NC_000008.9 | Chr8 | 38,262 | 38,262 | Submitted | NC_000008.9 |
NC_000009.10 | Chr9 | 30,068 | 30,068 | Submitted | NC_000009.10 |
NC_000010.9 | Chr10 | 39,198 | 39,198 | Submitted | NC_000010.9 |
NC_000011.8 | Chr11 | 36,959 | 36,959 | Submitted | NC_000011.8 |
NC_000012.10 | Chr12 | 38,267 | 38,267 | Submitted | NC_000012.10 |
NC_000013.9 | Chr13 | 29,532 | 29,532 | Submitted | NC_000013.9 |
NC_000014.7 | Chr14 | 25,317 | 25,317 | Submitted | NC_000014.7 |
NC_000015.8 | Chr15 | 23,569 | 23,569 | Submitted | NC_000015.8 |
NC_000016.8 | Chr16 | 23,343 | 23,343 | Submitted | NC_000016.8 |
NC_000017.9 | Chr17 | 24,875 | 24,875 | Submitted | NC_000017.9 |
NC_000018.8 | Chr18 | 22,022 | 22,022 | Submitted | NC_000018.8 |
NC_000019.8 | Chr19 | 20,813 | 20,813 | Submitted | NC_000019.8 |
NC_000020.9 | Chr20 | 16,747 | 16,747 | Submitted | NC_000020.9 |
NC_000021.7 | Chr21 | 11,407 | 11,407 | Submitted | NC_000021.7 |
NC_000022.9 | Chr22 | 10,787 | 10,787 | Submitted | NC_000022.9 |
NC_000023.9 | ChrX | 17,479 | 17,479 | Submitted | NC_000023.9 |
NC_000024.8 | ChrY | 944 | 944 | Submitted | NC_000024.8 |
Variant Region remap status | Variant Call remap status | ||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Sequence ID | Chr | Variant Regions on source | Perfect | Good | Pass | Fail | Mult | Variant Calls on source | Perfect | Good | Pass | Fail | Mult |
NC_000001.9 | Chr1 | 60,825 | 59,678 | 0 | 0 | 0 | 1,147 | 60,825 | 59,678 | 0 | 0 | 0 | 1,147 |
NC_000002.10 | Chr2 | 64,827 | 64,489 | 0 | 7 | 5 | 326 | 64,827 | 64,489 | 0 | 7 | 5 | 326 |
NC_000003.10 | Chr3 | 50,129 | 49,761 | 1 | 7 | 4 | 356 | 50,129 | 49,761 | 1 | 7 | 4 | 356 |
NC_000004.10 | Chr4 | 56,414 | 55,915 | 0 | 36 | 15 | 448 | 56,414 | 55,915 | 0 | 36 | 15 | 448 |
NC_000005.8 | Chr5 | 46,912 | 46,567 | 0 | 1 | 6 | 338 | 46,912 | 46,567 | 0 | 1 | 6 | 338 |
NC_000006.10 | Chr6 | 46,541 | 44,349 | 1 | 6 | 2 | 2,183 | 46,541 | 44,349 | 1 | 6 | 2 | 2,183 |
NC_000007.12 | Chr7 | 45,121 | 43,076 | 1 | 24 | 20 | 2,000 | 45,121 | 43,076 | 1 | 24 | 20 | 2,000 |
NC_000008.9 | Chr8 | 38,262 | 37,875 | 1 | 25 | 4 | 357 | 38,262 | 37,875 | 1 | 25 | 4 | 357 |
NC_000009.10 | Chr9 | 30,068 | 29,660 | 0 | 0 | 0 | 408 | 30,068 | 29,660 | 0 | 0 | 0 | 408 |
NC_000010.9 | Chr10 | 39,198 | 37,990 | 0 | 3 | 6 | 1,199 | 39,198 | 37,990 | 0 | 3 | 6 | 1,199 |
NC_000011.8 | Chr11 | 36,959 | 35,689 | 0 | 3 | 3 | 1,264 | 36,959 | 35,689 | 0 | 3 | 3 | 1,264 |
NC_000012.10 | Chr12 | 38,267 | 37,924 | 0 | 1 | 6 | 336 | 38,267 | 37,924 | 0 | 1 | 6 | 336 |
NC_000013.9 | Chr13 | 29,532 | 29,523 | 0 | 0 | 6 | 3 | 29,532 | 29,523 | 0 | 0 | 6 | 3 |
NC_000014.7 | Chr14 | 25,317 | 24,839 | 1 | 4 | 4 | 469 | 25,317 | 24,839 | 1 | 4 | 4 | 469 |
NC_000015.8 | Chr15 | 23,569 | 23,383 | 1 | 2 | 1 | 182 | 23,569 | 23,383 | 1 | 2 | 1 | 182 |
NC_000016.8 | Chr16 | 23,343 | 23,249 | 0 | 0 | 0 | 94 | 23,343 | 23,249 | 0 | 0 | 0 | 94 |
NC_000017.9 | Chr17 | 24,875 | 23,659 | 1 | 18 | 8 | 1,189 | 24,875 | 23,659 | 1 | 18 | 8 | 1,189 |
NC_000018.8 | Chr18 | 22,022 | 21,731 | 0 | 0 | 1 | 290 | 22,022 | 21,731 | 0 | 0 | 1 | 290 |
NC_000019.8 | Chr19 | 20,813 | 19,955 | 0 | 6 | 1 | 851 | 20,813 | 19,955 | 0 | 6 | 1 | 851 |
NC_000020.9 | Chr20 | 16,747 | 16,612 | 0 | 0 | 0 | 135 | 16,747 | 16,612 | 0 | 0 | 0 | 135 |
NC_000021.7 | Chr21 | 11,407 | 11,139 | 0 | 0 | 0 | 268 | 11,407 | 11,139 | 0 | 0 | 0 | 268 |
NC_000022.9 | Chr22 | 10,787 | 10,673 | 1 | 0 | 1 | 112 | 10,787 | 10,673 | 1 | 0 | 1 | 112 |
NC_000023.9 | ChrX | 17,479 | 14,423 | 1 | 5 | 4 | 3,046 | 17,479 | 14,423 | 1 | 5 | 4 | 3,046 |
NC_000024.8 | ChrY | 944 | 941 | 0 | 3 | 0 | 0 | 944 | 941 | 0 | 3 | 0 | 0 |
Variant Region remap status | Variant Call remap status | ||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Sequence ID | Chr | Variant Regions on source | Perfect | Good | Pass | Fail | Mult | Variant Calls on source | Perfect | Good | Pass | Fail | Mult |
NC_000001.9 | Chr1 | 60,825 | 59,059 | 0 | 117 | 63 | 1,586 | 60,825 | 59,059 | 0 | 117 | 63 | 1,586 |
NC_000002.10 | Chr2 | 64,827 | 63,873 | 2 | 17 | 14 | 921 | 64,827 | 63,873 | 2 | 17 | 14 | 921 |
NC_000003.10 | Chr3 | 50,129 | 48,955 | 1 | 40 | 17 | 1,116 | 50,129 | 48,955 | 1 | 40 | 17 | 1,116 |
NC_000004.10 | Chr4 | 56,414 | 55,406 | 0 | 50 | 19 | 939 | 56,414 | 55,406 | 0 | 50 | 19 | 939 |
NC_000005.8 | Chr5 | 46,912 | 46,010 | 0 | 6 | 6 | 890 | 46,912 | 46,010 | 0 | 6 | 6 | 890 |
NC_000006.10 | Chr6 | 46,541 | 43,927 | 1 | 13 | 5 | 2,595 | 46,541 | 43,927 | 1 | 13 | 5 | 2,595 |
NC_000007.12 | Chr7 | 45,121 | 43,775 | 1 | 39 | 26 | 1,280 | 45,121 | 43,775 | 1 | 39 | 26 | 1,280 |
NC_000008.9 | Chr8 | 38,262 | 35,525 | 3 | 59 | 10 | 2,665 | 38,262 | 35,525 | 3 | 59 | 10 | 2,665 |
NC_000009.10 | Chr9 | 30,068 | 29,671 | 0 | 4 | 8 | 385 | 30,068 | 29,671 | 0 | 4 | 8 | 385 |
NC_000010.9 | Chr10 | 39,198 | 38,772 | 1 | 17 | 9 | 399 | 39,198 | 38,772 | 1 | 17 | 9 | 399 |
NC_000011.8 | Chr11 | 36,959 | 35,752 | 0 | 40 | 5 | 1,162 | 36,959 | 35,752 | 0 | 40 | 5 | 1,162 |
NC_000012.10 | Chr12 | 38,267 | 36,804 | 2 | 3 | 14 | 1,444 | 38,267 | 36,804 | 2 | 3 | 14 | 1,444 |
NC_000013.9 | Chr13 | 29,532 | 29,050 | 0 | 3 | 8 | 471 | 29,532 | 29,050 | 0 | 3 | 8 | 471 |
NC_000014.7 | Chr14 | 25,317 | 24,088 | 1 | 77 | 29 | 1,122 | 25,317 | 24,088 | 1 | 77 | 29 | 1,122 |
NC_000015.8 | Chr15 | 23,569 | 22,280 | 1 | 9 | 7 | 1,272 | 23,569 | 22,280 | 1 | 9 | 7 | 1,272 |
NC_000016.8 | Chr16 | 23,343 | 22,080 | 0 | 3 | 1 | 1,259 | 23,343 | 22,080 | 0 | 3 | 1 | 1,259 |
NC_000017.9 | Chr17 | 24,875 | 22,724 | 4 | 23 | 11 | 2,113 | 24,875 | 22,724 | 4 | 23 | 11 | 2,113 |
NC_000018.8 | Chr18 | 22,022 | 21,359 | 0 | 11 | 2 | 650 | 22,022 | 21,359 | 0 | 11 | 2 | 650 |
NC_000019.8 | Chr19 | 20,813 | 19,682 | 1 | 37 | 17 | 1,076 | 20,813 | 19,682 | 1 | 37 | 17 | 1,076 |
NC_000020.9 | Chr20 | 16,747 | 16,566 | 0 | 13 | 2 | 166 | 16,747 | 16,566 | 0 | 13 | 2 | 166 |
NC_000021.7 | Chr21 | 11,407 | 11,028 | 0 | 52 | 1 | 326 | 11,407 | 11,028 | 0 | 52 | 1 | 326 |
NC_000022.9 | Chr22 | 10,787 | 10,284 | 2 | 43 | 28 | 430 | 10,787 | 10,284 | 2 | 43 | 28 | 430 |
NC_000023.9 | ChrX | 17,479 | 17,291 | 10 | 81 | 40 | 57 | 17,479 | 17,291 | 10 | 81 | 40 | 57 |
NC_000024.8 | ChrY | 944 | 938 | 0 | 3 | 0 | 3 | 944 | 938 | 0 | 3 | 0 | 3 |
Samplesets
Number of Samplesets: 2
- Sampleset ID:
- 1
- Name:
- HuRef
- Description:
- This is a single sample, belonging to J. Craig Venter.
- Size:
- 1
- Organisms:
- Homo sapiens
- Sampleset Phenotype(s):
- Health
- Sex:
- Male
- Sampleset ID:
- 2
- Name:
- Reference Sample Sampleset
- Size:
- 1
- Organisms:
- Homo sapiens
- Sampleset Phenotype(s):
- None reported
Sample ID | Cell Type | Subject ID | Sex | Ethnicity | Subject Age | Subject Phenotype |
---|---|---|---|---|---|---|
NA10851 | Blood | NA10851 | Male | Caucasian | 52 Years | Not reported |
Experimental Details
Experiment ID | Type | Method | Analysis | Platforms | Number of Variant Calls |
---|---|---|---|---|---|
1 | Discovery | Oligo aCGH | Probe signal intensity | Not Reported | 0 |
2 | Discovery | Oligo aCGH | Probe signal intensity | Not Reported | 0 |
3 | Discovery | SNP array | SNP genotyping analysis | Illumina HumanHap650Y Genotyping BeadChip | 0 |
4 | Discovery | SNP array | SNP genotyping analysis | [Mapping250K_Nsp] Affymetrix Mapping 250K Nsp SNP Array, [Mapping250K_Sty] Affymetrix Mapping 250K Sty2 SNP Array | 0 |
5 | Discovery | SNP array | SNP genotyping analysis | [Mapping250K_Nsp] Affymetrix Mapping 250K Nsp SNP Array, [Mapping250K_Sty] Affymetrix Mapping 250K Sty2 SNP Array | 0 |
6 | Discovery | SNP array | SNP genotyping analysis | [Mapping250K_Nsp] Affymetrix Mapping 250K Nsp SNP Array, [Mapping250K_Sty] Affymetrix Mapping 250K Sty2 SNP Array | 0 |
7 | Discovery | Merging of experiments 1,2,3,4,5,6 | Merging of experiments 1,2,3,4,5,6 | See merged experiments | 45 |
8 | Discovery | Sequencing | Sequence alignment | Sanger Sequencing | 780,313 |