nstd232 (Keane et al. 2023)
- Organism:
- Human
- Study Type:
- Collection
- Submitter:
- Thomas Keane
- Description:
- EVA variants submitted to dbSNP but filtered out due to length > 50bp. See Variant Summary counts for nstd232 in dbVar Variant Summary.
Detailed Information: Download 10824 Variant Regions, Download 10824 Variant Calls, Download Both, FTP
Variant Summary
Assembly used for analysis:
Submitted; Remapped: GRCh38.p14 (hg38)
Submitted; Remapped: GRCh37.p13 (hg19)
| Sequence ID | Chr | Number of Variant Regions | Number of Variant Calls | Placement type | Link to graphical display |
|---|---|---|---|---|---|
| NC_000001.11 | Chr1 | 844 | 844 | Remapped | NC_000001.11 |
| NC_000002.12 | Chr2 | 838 | 838 | Remapped | NC_000002.12 |
| NC_000003.12 | Chr3 | 577 | 577 | Remapped | NC_000003.12 |
| NC_000004.12 | Chr4 | 631 | 631 | Remapped | NC_000004.12 |
| NC_000005.10 | Chr5 | 589 | 589 | Remapped | NC_000005.10 |
| NC_000006.12 | Chr6 | 574 | 574 | Remapped | NC_000006.12 |
| NC_000007.14 | Chr7 | 658 | 658 | Remapped | NC_000007.14 |
| NC_000008.11 | Chr8 | 500 | 500 | Remapped | NC_000008.11 |
| NC_000009.12 | Chr9 | 384 | 384 | Remapped | NC_000009.12 |
| NC_000010.11 | Chr10 | 552 | 552 | Submitted; Remapped | NC_000010.11 |
| NC_000011.10 | Chr11 | 476 | 476 | Remapped | NC_000011.10 |
| NC_000012.12 | Chr12 | 497 | 497 | Remapped | NC_000012.12 |
| NC_000013.11 | Chr13 | 325 | 325 | Remapped | NC_000013.11 |
| NC_000014.9 | Chr14 | 297 | 297 | Remapped | NC_000014.9 |
| NC_000015.10 | Chr15 | 226 | 226 | Remapped | NC_000015.10 |
| NC_000016.10 | Chr16 | 345 | 345 | Remapped | NC_000016.10 |
| NC_000017.11 | Chr17 | 543 | 543 | Remapped | NC_000017.11 |
| NC_000018.10 | Chr18 | 285 | 285 | Remapped | NC_000018.10 |
| NC_000019.10 | Chr19 | 480 | 480 | Remapped | NC_000019.10 |
| NC_000020.11 | Chr20 | 285 | 285 | Remapped | NC_000020.11 |
| NC_000021.9 | Chr21 | 208 | 208 | Remapped | NC_000021.9 |
| NC_000022.11 | Chr22 | 220 | 220 | Remapped | NC_000022.11 |
| NC_000023.11 | ChrX | 432 | 432 | Remapped | NC_000023.11 |
| NC_000024.10 | ChrY | 22 | 22 | Remapped | NC_000024.10 |
| NT_187514.1 | Chr1|NT_187514.1 | 1 | 1 | Remapped | NT_187514.1 |
| NT_187515.1 | Chr1|NT_187515.1 | 2 | 2 | Remapped | NT_187515.1 |
| NT_187516.1 | Chr1|NT_187516.1 | 1 | 1 | Remapped | NT_187516.1 |
| NT_187517.1 | Chr1|NT_187517.1 | 1 | 1 | Remapped | NT_187517.1 |
| NT_187518.1 | Chr1|NT_187518.1 | 3 | 3 | Remapped | NT_187518.1 |
| NT_187519.1 | Chr1|NT_187519.1 | 1 | 1 | Remapped | NT_187519.1 |
| NT_187646.1 | Chr1|NT_187646.1 | 3 | 3 | Remapped | NT_187646.1 |
| NW_003315905.1 | Chr1|NW_003315905.1 | 1 | 1 | Remapped | NW_003315905.1 |
| NW_003315906.1 | Chr1|NW_003315906.1 | 3 | 3 | Remapped | NW_003315906.1 |
| NW_009646194.1 | Chr1|NW_009646194.1 | 2 | 2 | Remapped | NW_009646194.1 |
| NW_011332687.1 | Chr1|NW_011332687.1 | 1 | 1 | Remapped | NW_011332687.1 |
| NW_011332688.1 | Chr1|NW_011332688.1 | 2 | 2 | Remapped | NW_011332688.1 |
| NW_014040925.1 | Chr1|NW_014040925.1 | 1 | 1 | Remapped | NW_014040925.1 |
| NW_014040926.1 | Chr1|NW_014040926.1 | 2 | 2 | Remapped | NW_014040926.1 |
| NW_014040927.1 | Chr1|NW_014040927.1 | 3 | 3 | Remapped | NW_014040927.1 |
| NW_017852928.1 | Chr1|NW_017852928.1 | 2 | 2 | Remapped | NW_017852928.1 |
| NW_018654706.1 | Chr1|NW_018654706.1 | 1 | 1 | Remapped | NW_018654706.1 |
| NT_187522.1 | Chr2|NT_187522.1 | 3 | 3 | Remapped | NT_187522.1 |
| NT_187523.1 | Chr2|NT_187523.1 | 6 | 6 | Remapped | NT_187523.1 |
| NT_187524.1 | Chr2|NT_187524.1 | 2 | 2 | Remapped | NT_187524.1 |
| NT_187526.1 | Chr2|NT_187526.1 | 2 | 2 | Remapped | NT_187526.1 |
| NT_187527.1 | Chr2|NT_187527.1 | 9 | 9 | Remapped | NT_187527.1 |
| NT_187529.1 | Chr2|NT_187529.1 | 11 | 11 | Remapped | NT_187529.1 |
| NT_187647.1 | Chr2|NT_187647.1 | 6 | 6 | Remapped | NT_187647.1 |
| NW_011332689.1 | Chr2|NW_011332689.1 | 2 | 2 | Remapped | NW_011332689.1 |
| NW_011332690.1 | Chr2|NW_011332690.1 | 2 | 2 | Remapped | NW_011332690.1 |
| NW_012132915.1 | Chr2|NW_012132915.1 | 2 | 2 | Remapped | NW_012132915.1 |
| NW_015495299.1 | Chr2|NW_015495299.1 | 2 | 2 | Remapped | NW_015495299.1 |
| NW_018654710.1 | Chr2|NW_018654710.1 | 1 | 1 | Remapped | NW_018654710.1 |
| NT_187678.1 | Chr3|NT_187678.1 | 10 | 10 | Remapped | NT_187678.1 |
| NT_187688.1 | Chr3|NT_187688.1 | 11 | 11 | Remapped | NT_187688.1 |
| NT_187689.1 | Chr3|NT_187689.1 | 12 | 12 | Remapped | NT_187689.1 |
| NT_187690.1 | Chr3|NT_187690.1 | 11 | 11 | Remapped | NT_187690.1 |
| NT_187691.1 | Chr3|NT_187691.1 | 11 | 11 | Remapped | NT_187691.1 |
| NT_187532.1 | Chr3|NT_187532.1 | 11 | 11 | Remapped | NT_187532.1 |
| NT_187537.1 | Chr3|NT_187537.1 | 1 | 1 | Remapped | NT_187537.1 |
| NT_187538.1 | Chr3|NT_187538.1 | 1 | 1 | Remapped | NT_187538.1 |
| NT_187539.1 | Chr3|NT_187539.1 | 3 | 3 | Remapped | NT_187539.1 |
| NT_187649.1 | Chr3|NT_187649.1 | 11 | 11 | Remapped | NT_187649.1 |
| NW_003315913.1 | Chr3|NW_003315913.1 | 1 | 1 | Remapped | NW_003315913.1 |
| NW_003871060.2 | Chr3|NW_003871060.2 | 1 | 1 | Remapped | NW_003871060.2 |
| NW_012132916.1 | Chr3|NW_012132916.1 | 3 | 3 | Remapped | NW_012132916.1 |
| NW_017363813.1 | Chr3|NW_017363813.1 | 2 | 2 | Remapped | NW_017363813.1 |
| NW_018654711.1 | Chr3|NW_018654711.1 | 1 | 1 | Remapped | NW_018654711.1 |
| NW_019805488.1 | Chr3|NW_019805488.1 | 1 | 1 | Remapped | NW_019805488.1 |
| NW_019805489.1 | Chr3|NW_019805489.1 | 1 | 1 | Remapped | NW_019805489.1 |
| NT_187679.1 | Chr4|NT_187679.1 | 19 | 19 | Remapped | NT_187679.1 |
| NT_187542.1 | Chr4|NT_187542.1 | 1 | 1 | Remapped | NT_187542.1 |
| NT_187543.1 | Chr4|NT_187543.1 | 6 | 6 | Remapped | NT_187543.1 |
| NT_187544.1 | Chr4|NT_187544.1 | 1 | 1 | Remapped | NT_187544.1 |
| NT_187545.1 | Chr4|NT_187545.1 | 3 | 3 | Remapped | NT_187545.1 |
| NT_187650.1 | Chr4|NT_187650.1 | 8 | 8 | Remapped | NT_187650.1 |
| NW_013171800.1 | Chr4|NW_013171800.1 | 1 | 1 | Remapped | NW_013171800.1 |
| NW_013171801.1 | Chr4|NW_013171801.1 | 1 | 1 | Remapped | NW_013171801.1 |
| NW_017363814.1 | Chr4|NW_017363814.1 | 1 | 1 | Remapped | NW_017363814.1 |
| NT_187546.1 | Chr5|NT_187546.1 | 2 | 2 | Remapped | NT_187546.1 |
| NT_187547.1 | Chr5|NT_187547.1 | 6 | 6 | Remapped | NT_187547.1 |
| NT_187548.1 | Chr5|NT_187548.1 | 8 | 8 | Remapped | NT_187548.1 |
| NT_187550.1 | Chr5|NT_187550.1 | 5 | 5 | Remapped | NT_187550.1 |
| NT_187651.1 | Chr5|NT_187651.1 | 2 | 2 | Remapped | NT_187651.1 |
| NT_187652.1 | Chr5|NT_187652.1 | 3 | 3 | Remapped | NT_187652.1 |
| NW_003315917.2 | Chr5|NW_003315917.2 | 4 | 4 | Remapped | NW_003315917.2 |
| NW_016107297.1 | Chr5|NW_016107297.1 | 1 | 1 | Remapped | NW_016107297.1 |
| NW_016107298.1 | Chr5|NW_016107298.1 | 10 | 10 | Remapped | NW_016107298.1 |
| NT_187692.1 | Chr6|NT_187692.1 | 2 | 2 | Remapped | NT_187692.1 |
| NT_187552.1 | Chr6|NT_187552.1 | 1 | 1 | Remapped | NT_187552.1 |
| NT_187553.1 | Chr6|NT_187553.1 | 7 | 7 | Remapped | NT_187553.1 |
| NT_187555.1 | Chr6|NT_187555.1 | 2 | 2 | Remapped | NT_187555.1 |
| NT_187556.1 | Chr6|NT_187556.1 | 4 | 4 | Remapped | NT_187556.1 |
| NT_187557.1 | Chr6|NT_187557.1 | 1 | 1 | Remapped | NT_187557.1 |
| NW_004166862.2 | Chr6|NW_004166862.2 | 10 | 10 | Remapped | NW_004166862.2 |
| NW_012132918.1 | Chr6|NW_012132918.1 | 3 | 3 | Remapped | NW_012132918.1 |
| NW_018654713.1 | Chr6|NW_018654713.1 | 1 | 1 | Remapped | NW_018654713.1 |
| NT_187558.1 | Chr7|NT_187558.1 | 3 | 3 | Remapped | NT_187558.1 |
| NT_187560.1 | Chr7|NT_187560.1 | 18 | 18 | Remapped | NT_187560.1 |
| NT_187563.1 | Chr7|NT_187563.1 | 3 | 3 | Remapped | NT_187563.1 |
| NW_017852930.1 | Chr7|NW_017852930.1 | 1 | 1 | Remapped | NW_017852930.1 |
| NT_187680.1 | Chr8|NT_187680.1 | 5 | 5 | Remapped | NT_187680.1 |
| NT_187565.1 | Chr8|NT_187565.1 | 20 | 20 | Remapped | NT_187565.1 |
| NT_187567.1 | Chr8|NT_187567.1 | 2 | 2 | Remapped | NT_187567.1 |
| NT_187568.1 | Chr8|NT_187568.1 | 13 | 13 | Remapped | NT_187568.1 |
| NT_187571.1 | Chr8|NT_187571.1 | 11 | 11 | Remapped | NT_187571.1 |
| NT_187572.1 | Chr8|NT_187572.1 | 3 | 3 | Remapped | NT_187572.1 |
| NT_187573.1 | Chr8|NT_187573.1 | 5 | 5 | Remapped | NT_187573.1 |
| NT_187654.1 | Chr8|NT_187654.1 | 18 | 18 | Remapped | NT_187654.1 |
| NT_187655.1 | Chr8|NT_187655.1 | 6 | 6 | Remapped | NT_187655.1 |
| NW_018654716.1 | Chr8|NW_018654716.1 | 11 | 11 | Remapped | NW_018654716.1 |
| NW_018654717.1 | Chr8|NW_018654717.1 | 16 | 16 | Remapped | NW_018654717.1 |
| NW_009646201.1 | Chr9|NW_009646201.1 | 8 | 8 | Remapped | NW_009646201.1 |
| NT_187579.1 | Chr10|NT_187579.1 | 2 | 2 | Remapped | NT_187579.1 |
| NW_003315934.1 | Chr10|NW_003315934.1 | 1 | 1 | Remapped | NW_003315934.1 |
| NW_013171807.1 | Chr10|NW_013171807.1 | 1 | 1 | Remapped | NW_013171807.1 |
| NT_187681.1 | Chr11|NT_187681.1 | 5 | 5 | Remapped | NT_187681.1 |
| NT_187656.1 | Chr11|NT_187656.1 | 2 | 2 | Remapped | NT_187656.1 |
| NT_187657.1 | Chr11|NT_187657.1 | 5 | 5 | Remapped | NT_187657.1 |
| NT_187581.1 | Chr11|NT_187581.1 | 4 | 4 | Remapped | NT_187581.1 |
| NT_187582.1 | Chr11|NT_187582.1 | 2 | 2 | Remapped | NT_187582.1 |
| NT_187584.1 | Chr11|NT_187584.1 | 6 | 6 | Remapped | NT_187584.1 |
| NT_187585.1 | Chr11|NT_187585.1 | 2 | 2 | Remapped | NT_187585.1 |
| NT_187586.1 | Chr11|NT_187586.1 | 1 | 1 | Remapped | NT_187586.1 |
| NW_003315936.1 | Chr11|NW_003315936.1 | 1 | 1 | Remapped | NW_003315936.1 |
| NW_009646203.1 | Chr11|NW_009646203.1 | 5 | 5 | Remapped | NW_009646203.1 |
| NW_015148966.1 | Chr11|NW_015148966.1 | 4 | 4 | Remapped | NW_015148966.1 |
| NW_019805496.1 | Chr11|NW_019805496.1 | 3 | 3 | Remapped | NW_019805496.1 |
| NW_019805497.1 | Chr11|NW_019805497.1 | 1 | 1 | Remapped | NW_019805497.1 |
| NW_019805498.1 | Chr11|NW_019805498.1 | 1 | 1 | Remapped | NW_019805498.1 |
| NT_187658.1 | Chr12|NT_187658.1 | 4 | 4 | Remapped | NT_187658.1 |
| NT_187587.1 | Chr12|NT_187587.1 | 6 | 6 | Remapped | NT_187587.1 |
| NT_187589.1 | Chr12|NT_187589.1 | 1 | 1 | Remapped | NT_187589.1 |
| NT_187591.1 | Chr12|NT_187591.1 | 2 | 2 | Remapped | NT_187591.1 |
| NW_003315940.1 | Chr12|NW_003315940.1 | 1 | 1 | Remapped | NW_003315940.1 |
| NW_003571050.1 | Chr12|NW_003571050.1 | 3 | 3 | Remapped | NW_003571050.1 |
| NW_011332696.1 | Chr12|NW_011332696.1 | 1 | 1 | Remapped | NW_011332696.1 |
| NW_011332697.1 | Chr12|NW_011332697.1 | 1 | 1 | Remapped | NW_011332697.1 |
| NW_013171809.1 | Chr12|NW_013171809.1 | 2 | 2 | Remapped | NW_013171809.1 |
| NW_015148967.1 | Chr12|NW_015148967.1 | 1 | 1 | Remapped | NW_015148967.1 |
| NW_018654718.1 | Chr12|NW_018654718.1 | 6 | 6 | Remapped | NW_018654718.1 |
| NT_187592.1 | Chr13|NT_187592.1 | 6 | 6 | Remapped | NT_187592.1 |
| NT_187595.1 | Chr13|NT_187595.1 | 1 | 1 | Remapped | NT_187595.1 |
| NT_187596.1 | Chr13|NT_187596.1 | 4 | 4 | Remapped | NT_187596.1 |
| NW_011332699.1 | Chr13|NW_011332699.1 | 1 | 1 | Remapped | NW_011332699.1 |
| NW_011332700.1 | Chr13|NW_011332700.1 | 3 | 3 | Remapped | NW_011332700.1 |
| NT_187598.1 | Chr14|NT_187598.1 | 1 | 1 | Remapped | NT_187598.1 |
| NT_187599.1 | Chr14|NT_187599.1 | 2 | 2 | Remapped | NT_187599.1 |
| NT_187601.1 | Chr14|NT_187601.1 | 7 | 7 | Remapped | NT_187601.1 |
| NW_018654722.1 | Chr14|NW_018654722.1 | 9 | 9 | Remapped | NW_018654722.1 |
| NT_187660.1 | Chr15|NT_187660.1 | 6 | 6 | Remapped | NT_187660.1 |
| NT_187602.1 | Chr15|NT_187602.1 | 1 | 1 | Remapped | NT_187602.1 |
| NT_187606.1 | Chr15|NT_187606.1 | 2 | 2 | Remapped | NT_187606.1 |
| NW_003315944.2 | Chr15|NW_003315944.2 | 1 | 1 | Remapped | NW_003315944.2 |
| NT_187607.1 | Chr16|NT_187607.1 | 5 | 5 | Remapped | NT_187607.1 |
| NW_017852933.1 | Chr16|NW_017852933.1 | 4 | 4 | Remapped | NW_017852933.1 |
| NW_019805500.1 | Chr16|NW_019805500.1 | 1 | 1 | Remapped | NW_019805500.1 |
| NT_187662.1 | Chr17|NT_187662.1 | 11 | 11 | Remapped | NT_187662.1 |
| NT_187663.1 | Chr17|NT_187663.1 | 2 | 2 | Remapped | NT_187663.1 |
| NT_187664.1 | Chr17|NT_187664.1 | 6 | 6 | Remapped | NT_187664.1 |
| NT_187611.1 | Chr17|NT_187611.1 | 14 | 14 | Remapped | NT_187611.1 |
| NT_187612.1 | Chr17|NT_187612.1 | 17 | 17 | Remapped | NT_187612.1 |
| NT_187613.1 | Chr17|NT_187613.1 | 9 | 9 | Remapped | NT_187613.1 |
| NT_187615.1 | Chr17|NT_187615.1 | 3 | 3 | Remapped | NT_187615.1 |
| NW_003315952.3 | Chr17|NW_003315952.3 | 15 | 15 | Remapped | NW_003315952.3 |
| NW_003315954.1 | Chr17|NW_003315954.1 | 1 | 1 | Remapped | NW_003315954.1 |
| NW_003315955.1 | Chr17|NW_003315955.1 | 3 | 3 | Remapped | NW_003315955.1 |
| NW_003871091.1 | Chr17|NW_003871091.1 | 2 | 2 | Remapped | NW_003871091.1 |
| NW_016107299.1 | Chr17|NW_016107299.1 | 10 | 10 | Remapped | NW_016107299.1 |
| NW_017363817.1 | Chr17|NW_017363817.1 | 8 | 8 | Remapped | NW_017363817.1 |
| NW_017363819.1 | Chr17|NW_017363819.1 | 6 | 6 | Remapped | NW_017363819.1 |
| NT_187665.1 | Chr18|NT_187665.1 | 13 | 13 | Remapped | NT_187665.1 |
| NT_187666.1 | Chr18|NT_187666.1 | 3 | 3 | Remapped | NT_187666.1 |
| NT_187617.1 | Chr18|NT_187617.1 | 8 | 8 | Remapped | NT_187617.1 |
| NW_003315958.1 | Chr18|NW_003315958.1 | 9 | 9 | Remapped | NW_003315958.1 |
| NW_003315960.1 | Chr18|NW_003315960.1 | 1 | 1 | Remapped | NW_003315960.1 |
| NW_003315961.1 | Chr18|NW_003315961.1 | 3 | 3 | Remapped | NW_003315961.1 |
| NW_013171814.1 | Chr18|NW_013171814.1 | 5 | 5 | Remapped | NW_013171814.1 |
| NW_018654724.1 | Chr18|NW_018654724.1 | 1 | 1 | Remapped | NW_018654724.1 |
| NW_019805503.1 | Chr18|NW_019805503.1 | 1 | 1 | Remapped | NW_019805503.1 |
| NW_003571061.2 | Chr19|NW_003571061.2 | 8 | 8 | Remapped | NW_003571061.2 |
| NW_003571057.2 | Chr19|NW_003571057.2 | 7 | 7 | Remapped | NW_003571057.2 |
| NW_003571058.2 | Chr19|NW_003571058.2 | 7 | 7 | Remapped | NW_003571058.2 |
| NW_003571059.2 | Chr19|NW_003571059.2 | 7 | 7 | Remapped | NW_003571059.2 |
| NW_003571060.1 | Chr19|NW_003571060.1 | 10 | 10 | Remapped | NW_003571060.1 |
| NW_003571056.2 | Chr19|NW_003571056.2 | 7 | 7 | Remapped | NW_003571056.2 |
| NW_003571055.2 | Chr19|NW_003571055.2 | 8 | 8 | Remapped | NW_003571055.2 |
| NT_187622.1 | Chr19|NT_187622.1 | 3 | 3 | Remapped | NT_187622.1 |
| NW_003315962.1 | Chr19|NW_003315962.1 | 2 | 2 | Remapped | NW_003315962.1 |
| NW_003315963.1 | Chr19|NW_003315963.1 | 1 | 1 | Remapped | NW_003315963.1 |
| NW_003315965.1 | Chr19|NW_003315965.1 | 3 | 3 | Remapped | NW_003315965.1 |
| NW_003571054.1 | Chr19|NW_003571054.1 | 10 | 10 | Remapped | NW_003571054.1 |
| NW_014040929.1 | Chr19|NW_014040929.1 | 6 | 6 | Remapped | NW_014040929.1 |
| NT_187623.1 | Chr20|NT_187623.1 | 4 | 4 | Remapped | NT_187623.1 |
| NT_187624.1 | Chr20|NT_187624.1 | 4 | 4 | Remapped | NT_187624.1 |
| NT_187625.1 | Chr20|NT_187625.1 | 1 | 1 | Remapped | NT_187625.1 |
| NW_003315966.2 | Chr20|NW_003315966.2 | 1 | 1 | Remapped | NW_003315966.2 |
| NT_187628.1 | Chr21|NT_187628.1 | 1 | 1 | Remapped | NT_187628.1 |
| NW_003315967.2 | Chr21|NW_003315967.2 | 1 | 1 | Remapped | NW_003315967.2 |
| NW_003315968.2 | Chr21|NW_003315968.2 | 1 | 1 | Remapped | NW_003315968.2 |
| NW_003315970.2 | Chr21|NW_003315970.2 | 3 | 3 | Remapped | NW_003315970.2 |
| NW_015148969.1 | Chr22|NW_015148969.1 | 2 | 2 | Remapped | NW_015148969.1 |
| NT_187632.1 | Chr22|NT_187632.1 | 3 | 3 | Remapped | NT_187632.1 |
| NT_187667.1 | ChrX|NT_187667.1 | 15 | 15 | Remapped | NT_187667.1 |
| NW_017363820.1 | ChrX|NW_017363820.1 | 1 | 1 | Remapped | NW_017363820.1 |
| NT_187634.1 | ChrX|NT_187634.1 | 15 | 15 | Remapped | NT_187634.1 |
| NT_187693.1 | Chr19|NT_187693.1 | 13 | 13 | Remapped | NT_187693.1 |
| NT_187562.1 | Chr7|NT_187562.1 | 2 | 2 | Remapped | NT_187562.1 |
| NT_187653.1 | Chr7|NT_187653.1 | 3 | 3 | Remapped | NT_187653.1 |
| NT_187576.1 | Chr8|NT_187576.1 | 19 | 19 | Remapped | NT_187576.1 |
| NT_187594.1 | Chr13|NT_187594.1 | 1 | 1 | Remapped | NT_187594.1 |
| NW_011332698.1 | Chr13|NW_011332698.1 | 17 | 17 | Remapped | NW_011332698.1 |
| NT_113796.3 | Chr14|NT_113796.3 | 4 | 4 | Remapped | NT_113796.3 |
| NT_187600.1 | Chr14|NT_187600.1 | 15 | 15 | Remapped | NT_187600.1 |
| NT_187603.1 | Chr15|NT_187603.1 | 1 | 1 | Remapped | NT_187603.1 |
| NW_011332701.1 | Chr15|NW_011332701.1 | 6 | 6 | Remapped | NW_011332701.1 |
| NT_187614.1 | Chr17|NT_187614.1 | 12 | 12 | Remapped | NT_187614.1 |
| NW_009646206.1 | Chr19|NW_009646206.1 | 5 | 5 | Remapped | NW_009646206.1 |
| NT_187633.1 | Chr22|NT_187633.1 | 2 | 2 | Remapped | NT_187633.1 |
| NW_009646209.1 | ChrY|NW_009646209.1 | 4 | 4 | Remapped | NW_009646209.1 |
| NT_187513.1 | Unplaced|NT_187513.1 | 2 | 2 | Remapped | NT_187513.1 |
| Sequence ID | Chr | Number of Variant Regions | Number of Variant Calls | Placement type | Link to graphical display |
|---|---|---|---|---|---|
| NC_000001.10 | Chr1 | 854 | 854 | Submitted | NC_000001.10 |
| NC_000002.11 | Chr2 | 839 | 839 | Submitted | NC_000002.11 |
| NC_000003.11 | Chr3 | 577 | 577 | Submitted | NC_000003.11 |
| NC_000004.11 | Chr4 | 632 | 632 | Submitted | NC_000004.11 |
| NC_000005.9 | Chr5 | 589 | 589 | Submitted | NC_000005.9 |
| NC_000006.11 | Chr6 | 574 | 574 | Submitted | NC_000006.11 |
| NC_000007.13 | Chr7 | 658 | 658 | Submitted | NC_000007.13 |
| NC_000008.10 | Chr8 | 505 | 505 | Submitted | NC_000008.10 |
| NC_000009.11 | Chr9 | 386 | 386 | Submitted | NC_000009.11 |
| NC_000010.10 | Chr10 | 552 | 552 | Submitted; Remapped | NC_000010.10 |
| NC_000011.9 | Chr11 | 477 | 477 | Submitted | NC_000011.9 |
| NC_000012.11 | Chr12 | 497 | 497 | Submitted | NC_000012.11 |
| NC_000013.10 | Chr13 | 326 | 326 | Submitted | NC_000013.10 |
| NC_000014.8 | Chr14 | 301 | 301 | Submitted | NC_000014.8 |
| NC_000015.9 | Chr15 | 227 | 227 | Submitted | NC_000015.9 |
| NC_000016.9 | Chr16 | 345 | 345 | Submitted | NC_000016.9 |
| NC_000017.10 | Chr17 | 547 | 547 | Submitted | NC_000017.10 |
| NC_000018.9 | Chr18 | 285 | 285 | Submitted | NC_000018.9 |
| NC_000019.9 | Chr19 | 485 | 485 | Submitted | NC_000019.9 |
| NC_000020.10 | Chr20 | 285 | 285 | Submitted | NC_000020.10 |
| NC_000021.8 | Chr21 | 208 | 208 | Submitted | NC_000021.8 |
| NC_000022.10 | Chr22 | 221 | 221 | Submitted | NC_000022.10 |
| NC_000023.10 | ChrX | 432 | 432 | Submitted | NC_000023.10 |
| NC_000024.9 | ChrY | 22 | 22 | Submitted | NC_000024.9 |
| NW_003871071.1 | Chr10|NW_003871071.1 | 1 | 1 | Remapped | NW_003871071.1 |
| Variant Region remap status | Variant Call remap status | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Sequence ID | Chr | Variant Regions on source | Perfect | Good | Pass | Fail | Mult | Variant Calls on source | Perfect | Good | Pass | Fail | Mult |
| NC_000001.10 | Chr1 | 854 | 823 | 2 | 0 | 3 | 26 | 854 | 823 | 2 | 0 | 3 | 26 |
| NC_000002.11 | Chr2 | 839 | 795 | 1 | 2 | 0 | 41 | 839 | 795 | 1 | 2 | 0 | 41 |
| NC_000003.11 | Chr3 | 577 | 550 | 0 | 0 | 0 | 27 | 577 | 550 | 0 | 0 | 0 | 27 |
| NC_000004.11 | Chr4 | 632 | 603 | 0 | 0 | 1 | 28 | 632 | 603 | 0 | 0 | 1 | 28 |
| NC_000005.9 | Chr5 | 589 | 552 | 0 | 0 | 0 | 37 | 589 | 552 | 0 | 0 | 0 | 37 |
| NC_000006.11 | Chr6 | 574 | 542 | 1 | 0 | 0 | 31 | 574 | 542 | 1 | 0 | 0 | 31 |
| NC_000007.13 | Chr7 | 658 | 631 | 0 | 0 | 0 | 27 | 658 | 631 | 0 | 0 | 0 | 27 |
| NC_000008.10 | Chr8 | 505 | 393 | 1 | 1 | 0 | 110 | 505 | 393 | 1 | 1 | 0 | 110 |
| NC_000009.11 | Chr9 | 386 | 373 | 1 | 1 | 2 | 9 | 386 | 373 | 1 | 1 | 2 | 9 |
| NC_000010.10 | Chr10 | 551 | 548 | 0 | 0 | 0 | 3 | 551 | 548 | 0 | 0 | 0 | 3 |
| NC_000011.9 | Chr11 | 477 | 442 | 1 | 1 | 0 | 33 | 477 | 442 | 1 | 1 | 0 | 33 |
| NC_000012.11 | Chr12 | 497 | 471 | 0 | 0 | 0 | 26 | 497 | 471 | 0 | 0 | 0 | 26 |
| NC_000013.10 | Chr13 | 326 | 295 | 0 | 0 | 0 | 31 | 326 | 295 | 0 | 0 | 0 | 31 |
| NC_000014.8 | Chr14 | 301 | 264 | 0 | 1 | 3 | 33 | 301 | 264 | 0 | 1 | 3 | 33 |
| NC_000015.9 | Chr15 | 227 | 217 | 0 | 0 | 0 | 10 | 227 | 217 | 0 | 0 | 0 | 10 |
| NC_000016.9 | Chr16 | 345 | 335 | 0 | 0 | 0 | 10 | 345 | 335 | 0 | 0 | 0 | 10 |
| NC_000017.10 | Chr17 | 547 | 446 | 0 | 0 | 1 | 100 | 547 | 446 | 0 | 0 | 1 | 100 |
| NC_000018.9 | Chr18 | 285 | 253 | 0 | 0 | 0 | 32 | 285 | 253 | 0 | 0 | 0 | 32 |
| NC_000019.9 | Chr19 | 485 | 450 | 0 | 1 | 2 | 32 | 485 | 450 | 0 | 1 | 2 | 32 |
| NC_000020.10 | Chr20 | 285 | 274 | 1 | 0 | 0 | 10 | 285 | 274 | 1 | 0 | 0 | 10 |
| NC_000021.8 | Chr21 | 208 | 201 | 0 | 0 | 0 | 7 | 208 | 201 | 0 | 0 | 0 | 7 |
| NC_000022.10 | Chr22 | 221 | 213 | 0 | 0 | 1 | 7 | 221 | 213 | 0 | 0 | 1 | 7 |
| NC_000023.10 | ChrX | 432 | 412 | 1 | 3 | 0 | 16 | 432 | 412 | 1 | 3 | 0 | 16 |
| NC_000024.9 | ChrY | 22 | 18 | 0 | 0 | 0 | 4 | 22 | 18 | 0 | 0 | 0 | 4 |
| Variant Region remap status | Variant Call remap status | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Sequence ID | Chr | Variant Regions on source | Perfect | Good | Pass | Fail | Mult | Variant Calls on source | Perfect | Good | Pass | Fail | Mult |
| NC_000010.11 | Chr10 | 1 | 0 | 0 | 0 | 0 | 1 | 1 | 0 | 0 | 0 | 0 | 1 |
Samplesets
Number of Samplesets: 1
- Size:
- 0 (sample data not available)
- Organisms:
- Homo sapiens
- Sampleset Phenotype(s):
- None reported
Experimental Details
| Experiment ID | Type | Method | Analysis | Number of Variant Calls |
|---|---|---|---|---|
| 1 | Discovery | Sequencing | Sequence alignment | 10,824 |