nstd6 (Mills et al. 2006)
- Organism:
- Human
- Study Type:
- Control Set
- Submitter:
- Scott Devine
- Description:
- In this report, we describe an initial map of human INDEL variation that contains 415,434 unique INDEL polymorphisms. These INDELs were identified with a computational approach using DNA re-sequencing traces originally generated for SNP discovery. See Variant Summary counts for nstd6 in dbVar Variant Summary.
- Publication(s):
- Mills et al. 2006
Detailed Information: Download 415434 Variant Regions, Download 415434 Variant Calls, Download Both, FTP
Variant Summary
Assembly used for analysis:
Remapped: GRCh38.p12 (hg38)
Remapped: GRCh37.p13 (hg19)
Submitted: NCBI35 (hg17)
Sequence ID | Chr | Number of Variant Regions | Number of Variant Calls | Placement type | Link to graphical display |
---|---|---|---|---|---|
NC_000001.11 | Chr1 | 23,920 | 23,920 | Remapped | NC_000001.11 |
NC_000002.12 | Chr2 | 25,326 | 25,326 | Remapped | NC_000002.12 |
NC_000003.12 | Chr3 | 22,365 | 22,365 | Remapped | NC_000003.12 |
NC_000004.12 | Chr4 | 55,816 | 55,816 | Remapped | NC_000004.12 |
NC_000005.10 | Chr5 | 35,986 | 35,986 | Remapped | NC_000005.10 |
NC_000006.12 | Chr6 | 20,012 | 20,012 | Remapped | NC_000006.12 |
NC_000007.14 | Chr7 | 16,410 | 16,410 | Remapped | NC_000007.14 |
NC_000008.11 | Chr8 | 31,362 | 31,362 | Remapped | NC_000008.11 |
NC_000009.12 | Chr9 | 18,265 | 18,265 | Remapped | NC_000009.12 |
NC_000010.11 | Chr10 | 15,512 | 15,512 | Remapped | NC_000010.11 |
NC_000011.10 | Chr11 | 14,313 | 14,313 | Remapped | NC_000011.10 |
NC_000012.12 | Chr12 | 13,959 | 13,959 | Remapped | NC_000012.12 |
NC_000013.11 | Chr13 | 10,980 | 10,980 | Remapped | NC_000013.11 |
NC_000014.9 | Chr14 | 20,727 | 20,727 | Remapped | NC_000014.9 |
NC_000015.10 | Chr15 | 9,066 | 9,066 | Remapped | NC_000015.10 |
NC_000016.10 | Chr16 | 8,761 | 8,761 | Remapped | NC_000016.10 |
NC_000017.11 | Chr17 | 8,630 | 8,630 | Remapped | NC_000017.11 |
NC_000018.10 | Chr18 | 19,795 | 19,795 | Remapped | NC_000018.10 |
NC_000019.10 | Chr19 | 5,887 | 5,887 | Remapped | NC_000019.10 |
NC_000020.11 | Chr20 | 20,175 | 20,175 | Remapped | NC_000020.11 |
NC_000021.9 | Chr21 | 4,703 | 4,703 | Remapped | NC_000021.9 |
NC_000022.11 | Chr22 | 4,087 | 4,087 | Remapped | NC_000022.11 |
NC_000023.11 | ChrX | 8,183 | 8,183 | Remapped | NC_000023.11 |
NC_000024.10 | ChrY | 313 | 313 | Remapped | NC_000024.10 |
NT_187366.1 | Chr1|NT_187366.1 | 1 | 1 | Remapped | NT_187366.1 |
NT_187367.1 | Chr1|NT_187367.1 | 1 | 1 | Remapped | NT_187367.1 |
NT_187514.1 | Chr1|NT_187514.1 | 10 | 10 | Remapped | NT_187514.1 |
NT_187515.1 | Chr1|NT_187515.1 | 25 | 25 | Remapped | NT_187515.1 |
NT_187516.1 | Chr1|NT_187516.1 | 77 | 77 | Remapped | NT_187516.1 |
NT_187517.1 | Chr1|NT_187517.1 | 4 | 4 | Remapped | NT_187517.1 |
NT_187518.1 | Chr1|NT_187518.1 | 52 | 52 | Remapped | NT_187518.1 |
NT_187519.1 | Chr1|NT_187519.1 | 33 | 33 | Remapped | NT_187519.1 |
NT_187521.1 | Chr1|NT_187521.1 | 4 | 4 | Remapped | NT_187521.1 |
NT_187646.1 | Chr1|NT_187646.1 | 52 | 52 | Remapped | NT_187646.1 |
NW_003315905.1 | Chr1|NW_003315905.1 | 16 | 16 | Remapped | NW_003315905.1 |
NW_003315906.1 | Chr1|NW_003315906.1 | 4 | 4 | Remapped | NW_003315906.1 |
NW_003315907.2 | Chr1|NW_003315907.2 | 38 | 38 | Remapped | NW_003315907.2 |
NW_009646194.1 | Chr1|NW_009646194.1 | 15 | 15 | Remapped | NW_009646194.1 |
NW_009646195.1 | Chr1|NW_009646195.1 | 8 | 8 | Remapped | NW_009646195.1 |
NW_009646196.1 | Chr1|NW_009646196.1 | 16 | 16 | Remapped | NW_009646196.1 |
NW_011332687.1 | Chr1|NW_011332687.1 | 71 | 71 | Remapped | NW_011332687.1 |
NW_011332688.1 | Chr1|NW_011332688.1 | 23 | 23 | Remapped | NW_011332688.1 |
NW_012132914.1 | Chr1|NW_012132914.1 | 19 | 19 | Remapped | NW_012132914.1 |
NW_014040925.1 | Chr1|NW_014040925.1 | 8 | 8 | Remapped | NW_014040925.1 |
NW_014040926.1 | Chr1|NW_014040926.1 | 40 | 40 | Remapped | NW_014040926.1 |
NW_014040927.1 | Chr1|NW_014040927.1 | 17 | 17 | Remapped | NW_014040927.1 |
NW_015495298.1 | Chr1|NW_015495298.1 | 5 | 5 | Remapped | NW_015495298.1 |
NW_017852928.1 | Chr1|NW_017852928.1 | 42 | 42 | Remapped | NW_017852928.1 |
NW_018654706.1 | Chr1|NW_018654706.1 | 8 | 8 | Remapped | NW_018654706.1 |
NW_018654707.1 | Chr1|NW_018654707.1 | 15 | 15 | Remapped | NW_018654707.1 |
NW_018654708.1 | Chr1|NW_018654708.1 | 23 | 23 | Remapped | NW_018654708.1 |
NW_019805487.1 | Chr1|NW_019805487.1 | 1 | 1 | Remapped | NW_019805487.1 |
NT_187522.1 | Chr2|NT_187522.1 | 20 | 20 | Remapped | NT_187522.1 |
NT_187523.1 | Chr2|NT_187523.1 | 9 | 9 | Remapped | NT_187523.1 |
NT_187525.1 | Chr2|NT_187525.1 | 22 | 22 | Remapped | NT_187525.1 |
NT_187526.1 | Chr2|NT_187526.1 | 7 | 7 | Remapped | NT_187526.1 |
NT_187527.1 | Chr2|NT_187527.1 | 3 | 3 | Remapped | NT_187527.1 |
NT_187529.1 | Chr2|NT_187529.1 | 36 | 36 | Remapped | NT_187529.1 |
NT_187530.1 | Chr2|NT_187530.1 | 14 | 14 | Remapped | NT_187530.1 |
NT_187531.1 | Chr2|NT_187531.1 | 1 | 1 | Remapped | NT_187531.1 |
NT_187647.1 | Chr2|NT_187647.1 | 9 | 9 | Remapped | NT_187647.1 |
NT_187648.1 | Chr2|NT_187648.1 | 1 | 1 | Remapped | NT_187648.1 |
NW_003315908.1 | Chr2|NW_003315908.1 | 13 | 13 | Remapped | NW_003315908.1 |
NW_003315909.1 | Chr2|NW_003315909.1 | 24 | 24 | Remapped | NW_003315909.1 |
NW_003571033.2 | Chr2|NW_003571033.2 | 4 | 4 | Remapped | NW_003571033.2 |
NW_011332689.1 | Chr2|NW_011332689.1 | 23 | 23 | Remapped | NW_011332689.1 |
NW_011332690.1 | Chr2|NW_011332690.1 | 72 | 72 | Remapped | NW_011332690.1 |
NW_012132915.1 | Chr2|NW_012132915.1 | 12 | 12 | Remapped | NW_012132915.1 |
NW_015495299.1 | Chr2|NW_015495299.1 | 54 | 54 | Remapped | NW_015495299.1 |
NW_018654709.1 | Chr2|NW_018654709.1 | 8 | 8 | Remapped | NW_018654709.1 |
NW_018654710.1 | Chr2|NW_018654710.1 | 14 | 14 | Remapped | NW_018654710.1 |
NT_187678.1 | Chr3|NT_187678.1 | 53 | 53 | Remapped | NT_187678.1 |
NT_187688.1 | Chr3|NT_187688.1 | 46 | 46 | Remapped | NT_187688.1 |
NT_187689.1 | Chr3|NT_187689.1 | 64 | 64 | Remapped | NT_187689.1 |
NT_187690.1 | Chr3|NT_187690.1 | 42 | 42 | Remapped | NT_187690.1 |
NT_187691.1 | Chr3|NT_187691.1 | 45 | 45 | Remapped | NT_187691.1 |
NT_187532.1 | Chr3|NT_187532.1 | 64 | 64 | Remapped | NT_187532.1 |
NT_187533.1 | Chr3|NT_187533.1 | 27 | 27 | Remapped | NT_187533.1 |
NT_187534.1 | Chr3|NT_187534.1 | 22 | 22 | Remapped | NT_187534.1 |
NT_187535.1 | Chr3|NT_187535.1 | 7 | 7 | Remapped | NT_187535.1 |
NT_187536.1 | Chr3|NT_187536.1 | 18 | 18 | Remapped | NT_187536.1 |
NT_187537.1 | Chr3|NT_187537.1 | 1 | 1 | Remapped | NT_187537.1 |
NT_187538.1 | Chr3|NT_187538.1 | 22 | 22 | Remapped | NT_187538.1 |
NT_187539.1 | Chr3|NT_187539.1 | 2 | 2 | Remapped | NT_187539.1 |
NT_187649.1 | Chr3|NT_187649.1 | 40 | 40 | Remapped | NT_187649.1 |
NW_003315913.1 | Chr3|NW_003315913.1 | 20 | 20 | Remapped | NW_003315913.1 |
NW_003871060.2 | Chr3|NW_003871060.2 | 29 | 29 | Remapped | NW_003871060.2 |
NW_009646197.1 | Chr3|NW_009646197.1 | 29 | 29 | Remapped | NW_009646197.1 |
NW_009646198.1 | Chr3|NW_009646198.1 | 1 | 1 | Remapped | NW_009646198.1 |
NW_011332691.1 | Chr3|NW_011332691.1 | 41 | 41 | Remapped | NW_011332691.1 |
NW_012132916.1 | Chr3|NW_012132916.1 | 31 | 31 | Remapped | NW_012132916.1 |
NW_017363813.1 | Chr3|NW_017363813.1 | 35 | 35 | Remapped | NW_017363813.1 |
NW_018654711.1 | Chr3|NW_018654711.1 | 21 | 21 | Remapped | NW_018654711.1 |
NW_019805488.1 | Chr3|NW_019805488.1 | 14 | 14 | Remapped | NW_019805488.1 |
NW_019805489.1 | Chr3|NW_019805489.1 | 32 | 32 | Remapped | NW_019805489.1 |
NW_019805490.1 | Chr3|NW_019805490.1 | 20 | 20 | Remapped | NW_019805490.1 |
NW_019805491.1 | Chr3|NW_019805491.1 | 10 | 10 | Remapped | NW_019805491.1 |
NW_019805492.1 | Chr3|NW_019805492.1 | 19 | 19 | Remapped | NW_019805492.1 |
NT_187679.1 | Chr4|NT_187679.1 | 368 | 368 | Remapped | NT_187679.1 |
NT_167250.2 | Chr4|NT_167250.2 | 102 | 102 | Remapped | NT_167250.2 |
NT_187540.1 | Chr4|NT_187540.1 | 64 | 64 | Remapped | NT_187540.1 |
NT_187541.1 | Chr4|NT_187541.1 | 29 | 29 | Remapped | NT_187541.1 |
NT_187542.1 | Chr4|NT_187542.1 | 50 | 50 | Remapped | NT_187542.1 |
NT_187543.1 | Chr4|NT_187543.1 | 110 | 110 | Remapped | NT_187543.1 |
NT_187544.1 | Chr4|NT_187544.1 | 39 | 39 | Remapped | NT_187544.1 |
NT_187545.1 | Chr4|NT_187545.1 | 90 | 90 | Remapped | NT_187545.1 |
NT_187650.1 | Chr4|NT_187650.1 | 108 | 108 | Remapped | NT_187650.1 |
NW_003315914.1 | Chr4|NW_003315914.1 | 50 | 50 | Remapped | NW_003315914.1 |
NW_003315915.1 | Chr4|NW_003315915.1 | 94 | 94 | Remapped | NW_003315915.1 |
NW_013171799.1 | Chr4|NW_013171799.1 | 24 | 24 | Remapped | NW_013171799.1 |
NW_013171800.1 | Chr4|NW_013171800.1 | 30 | 30 | Remapped | NW_013171800.1 |
NW_013171801.1 | Chr4|NW_013171801.1 | 86 | 86 | Remapped | NW_013171801.1 |
NW_017363814.1 | Chr4|NW_017363814.1 | 118 | 118 | Remapped | NW_017363814.1 |
NT_187546.1 | Chr5|NT_187546.1 | 50 | 50 | Remapped | NT_187546.1 |
NT_187547.1 | Chr5|NT_187547.1 | 40 | 40 | Remapped | NT_187547.1 |
NT_187548.1 | Chr5|NT_187548.1 | 38 | 38 | Remapped | NT_187548.1 |
NT_187549.1 | Chr5|NT_187549.1 | 28 | 28 | Remapped | NT_187549.1 |
NT_187550.1 | Chr5|NT_187550.1 | 19 | 19 | Remapped | NT_187550.1 |
NT_187551.1 | Chr5|NT_187551.1 | 39 | 39 | Remapped | NT_187551.1 |
NT_187651.1 | Chr5|NT_187651.1 | 49 | 49 | Remapped | NT_187651.1 |
NT_187652.1 | Chr5|NT_187652.1 | 45 | 45 | Remapped | NT_187652.1 |
NW_003315917.2 | Chr5|NW_003315917.2 | 98 | 98 | Remapped | NW_003315917.2 |
NW_003315918.1 | Chr5|NW_003315918.1 | 6 | 6 | Remapped | NW_003315918.1 |
NW_003315919.1 | Chr5|NW_003315919.1 | 45 | 45 | Remapped | NW_003315919.1 |
NW_003315920.1 | Chr5|NW_003315920.1 | 11 | 11 | Remapped | NW_003315920.1 |
NW_003571036.1 | Chr5|NW_003571036.1 | 52 | 52 | Remapped | NW_003571036.1 |
NW_009646199.1 | Chr5|NW_009646199.1 | 26 | 26 | Remapped | NW_009646199.1 |
NW_016107297.1 | Chr5|NW_016107297.1 | 48 | 48 | Remapped | NW_016107297.1 |
NW_016107298.1 | Chr5|NW_016107298.1 | 128 | 128 | Remapped | NW_016107298.1 |
NW_018654712.1 | Chr5|NW_018654712.1 | 35 | 35 | Remapped | NW_018654712.1 |
NT_187692.1 | Chr6|NT_187692.1 | 10 | 10 | Remapped | NT_187692.1 |
NT_167246.2 | Chr6|NT_167246.2 | 590 | 590 | Remapped | NT_167246.2 |
NT_167247.2 | Chr6|NT_167247.2 | 512 | 512 | Remapped | NT_167247.2 |
NT_167248.2 | Chr6|NT_167248.2 | 622 | 622 | Remapped | NT_167248.2 |
NT_167249.2 | Chr6|NT_167249.2 | 579 | 579 | Remapped | NT_167249.2 |
NT_167245.2 | Chr6|NT_167245.2 | 587 | 587 | Remapped | NT_167245.2 |
NT_113891.3 | Chr6|NT_113891.3 | 662 | 662 | Remapped | NT_113891.3 |
NT_167244.2 | Chr6|NT_167244.2 | 314 | 314 | Remapped | NT_167244.2 |
NT_187552.1 | Chr6|NT_187552.1 | 21 | 21 | Remapped | NT_187552.1 |
NT_187553.1 | Chr6|NT_187553.1 | 37 | 37 | Remapped | NT_187553.1 |
NT_187554.1 | Chr6|NT_187554.1 | 10 | 10 | Remapped | NT_187554.1 |
NT_187555.1 | Chr6|NT_187555.1 | 26 | 26 | Remapped | NT_187555.1 |
NT_187556.1 | Chr6|NT_187556.1 | 87 | 87 | Remapped | NT_187556.1 |
NT_187557.1 | Chr6|NT_187557.1 | 7 | 7 | Remapped | NT_187557.1 |
NW_003315921.1 | Chr6|NW_003315921.1 | 8 | 8 | Remapped | NW_003315921.1 |
NW_004166862.2 | Chr6|NW_004166862.2 | 32 | 32 | Remapped | NW_004166862.2 |
NW_009646200.1 | Chr6|NW_009646200.1 | 34 | 34 | Remapped | NW_009646200.1 |
NW_012132918.1 | Chr6|NW_012132918.1 | 14 | 14 | Remapped | NW_012132918.1 |
NW_013171802.1 | Chr6|NW_013171802.1 | 27 | 27 | Remapped | NW_013171802.1 |
NW_013171803.1 | Chr6|NW_013171803.1 | 3 | 3 | Remapped | NW_013171803.1 |
NW_017363815.1 | Chr6|NW_017363815.1 | 7 | 7 | Remapped | NW_017363815.1 |
NW_018654713.1 | Chr6|NW_018654713.1 | 35 | 35 | Remapped | NW_018654713.1 |
NT_187558.1 | Chr7|NT_187558.1 | 15 | 15 | Remapped | NT_187558.1 |
NT_187559.1 | Chr7|NT_187559.1 | 14 | 14 | Remapped | NT_187559.1 |
NT_187560.1 | Chr7|NT_187560.1 | 50 | 50 | Remapped | NT_187560.1 |
NT_187561.1 | Chr7|NT_187561.1 | 6 | 6 | Remapped | NT_187561.1 |
NT_187562.1 | Chr7|NT_187562.1 | 135 | 135 | Remapped | NT_187562.1 |
NT_187563.1 | Chr7|NT_187563.1 | 15 | 15 | Remapped | NT_187563.1 |
NT_187564.1 | Chr7|NT_187564.1 | 53 | 53 | Remapped | NT_187564.1 |
NT_187653.1 | Chr7|NT_187653.1 | 15 | 15 | Remapped | NT_187653.1 |
NW_003315922.2 | Chr7|NW_003315922.2 | 9 | 9 | Remapped | NW_003315922.2 |
NW_012132919.1 | Chr7|NW_012132919.1 | 19 | 19 | Remapped | NW_012132919.1 |
NW_017852929.1 | Chr7|NW_017852929.1 | 16 | 16 | Remapped | NW_017852929.1 |
NW_017852930.1 | Chr7|NW_017852930.1 | 37 | 37 | Remapped | NW_017852930.1 |
NW_018654714.1 | Chr7|NW_018654714.1 | 37 | 37 | Remapped | NW_018654714.1 |
NW_018654715.1 | Chr7|NW_018654715.1 | 39 | 39 | Remapped | NW_018654715.1 |
NW_019805493.1 | Chr7|NW_019805493.1 | 22 | 22 | Remapped | NW_019805493.1 |
NT_187680.1 | Chr8|NT_187680.1 | 55 | 55 | Remapped | NT_187680.1 |
NT_187565.1 | Chr8|NT_187565.1 | 102 | 102 | Remapped | NT_187565.1 |
NT_187566.1 | Chr8|NT_187566.1 | 9 | 9 | Remapped | NT_187566.1 |
NT_187567.1 | Chr8|NT_187567.1 | 83 | 83 | Remapped | NT_187567.1 |
NT_187568.1 | Chr8|NT_187568.1 | 31 | 31 | Remapped | NT_187568.1 |
NT_187569.1 | Chr8|NT_187569.1 | 11 | 11 | Remapped | NT_187569.1 |
NT_187570.1 | Chr8|NT_187570.1 | 15 | 15 | Remapped | NT_187570.1 |
NT_187571.1 | Chr8|NT_187571.1 | 53 | 53 | Remapped | NT_187571.1 |
NT_187572.1 | Chr8|NT_187572.1 | 19 | 19 | Remapped | NT_187572.1 |
NT_187573.1 | Chr8|NT_187573.1 | 36 | 36 | Remapped | NT_187573.1 |
NT_187574.1 | Chr8|NT_187574.1 | 16 | 16 | Remapped | NT_187574.1 |
NT_187575.1 | Chr8|NT_187575.1 | 1 | 1 | Remapped | NT_187575.1 |
NT_187576.1 | Chr8|NT_187576.1 | 324 | 324 | Remapped | NT_187576.1 |
NT_187577.1 | Chr8|NT_187577.1 | 88 | 88 | Remapped | NT_187577.1 |
NT_187654.1 | Chr8|NT_187654.1 | 88 | 88 | Remapped | NT_187654.1 |
NT_187655.1 | Chr8|NT_187655.1 | 58 | 58 | Remapped | NT_187655.1 |
NW_017852931.1 | Chr8|NW_017852931.1 | 27 | 27 | Remapped | NW_017852931.1 |
NW_017852932.1 | Chr8|NW_017852932.1 | 46 | 46 | Remapped | NW_017852932.1 |
NW_018654716.1 | Chr8|NW_018654716.1 | 15 | 15 | Remapped | NW_018654716.1 |
NW_018654717.1 | Chr8|NW_018654717.1 | 1,246 | 1,246 | Remapped | NW_018654717.1 |
NW_019805494.1 | Chr8|NW_019805494.1 | 13 | 13 | Remapped | NW_019805494.1 |
NT_187578.1 | Chr9|NT_187578.1 | 71 | 71 | Remapped | NT_187578.1 |
NW_003315928.1 | Chr9|NW_003315928.1 | 19 | 19 | Remapped | NW_003315928.1 |
NW_003315929.1 | Chr9|NW_003315929.1 | 7 | 7 | Remapped | NW_003315929.1 |
NW_003315930.1 | Chr9|NW_003315930.1 | 35 | 35 | Remapped | NW_003315930.1 |
NW_003315931.1 | Chr9|NW_003315931.1 | 16 | 16 | Remapped | NW_003315931.1 |
NW_009646201.1 | Chr9|NW_009646201.1 | 40 | 40 | Remapped | NW_009646201.1 |
NW_013171804.1 | Chr9|NW_013171804.1 | 21 | 21 | Remapped | NW_013171804.1 |
NW_013171805.1 | Chr9|NW_013171805.1 | 24 | 24 | Remapped | NW_013171805.1 |
NT_187580.1 | Chr10|NT_187580.1 | 24 | 24 | Remapped | NT_187580.1 |
NW_003315934.1 | Chr10|NW_003315934.1 | 10 | 10 | Remapped | NW_003315934.1 |
NW_003315935.1 | Chr10|NW_003315935.1 | 12 | 12 | Remapped | NW_003315935.1 |
NW_009646202.1 | Chr10|NW_009646202.1 | 37 | 37 | Remapped | NW_009646202.1 |
NW_013171806.1 | Chr10|NW_013171806.1 | 13 | 13 | Remapped | NW_013171806.1 |
NW_013171807.1 | Chr10|NW_013171807.1 | 20 | 20 | Remapped | NW_013171807.1 |
NT_187681.1 | Chr11|NT_187681.1 | 34 | 34 | Remapped | NT_187681.1 |
NT_187656.1 | Chr11|NT_187656.1 | 3 | 3 | Remapped | NT_187656.1 |
NT_187657.1 | Chr11|NT_187657.1 | 21 | 21 | Remapped | NT_187657.1 |
NT_187581.1 | Chr11|NT_187581.1 | 25 | 25 | Remapped | NT_187581.1 |
NT_187583.1 | Chr11|NT_187583.1 | 23 | 23 | Remapped | NT_187583.1 |
NT_187584.1 | Chr11|NT_187584.1 | 21 | 21 | Remapped | NT_187584.1 |
NT_187585.1 | Chr11|NT_187585.1 | 42 | 42 | Remapped | NT_187585.1 |
NT_187586.1 | Chr11|NT_187586.1 | 21 | 21 | Remapped | NT_187586.1 |
NW_003315936.1 | Chr11|NW_003315936.1 | 15 | 15 | Remapped | NW_003315936.1 |
NW_003871073.1 | Chr11|NW_003871073.1 | 12 | 12 | Remapped | NW_003871073.1 |
NW_003871074.1 | Chr11|NW_003871074.1 | 16 | 16 | Remapped | NW_003871074.1 |
NW_009646203.1 | Chr11|NW_009646203.1 | 22 | 22 | Remapped | NW_009646203.1 |
NW_011332695.1 | Chr11|NW_011332695.1 | 24 | 24 | Remapped | NW_011332695.1 |
NW_013171808.1 | Chr11|NW_013171808.1 | 24 | 24 | Remapped | NW_013171808.1 |
NW_015148966.1 | Chr11|NW_015148966.1 | 24 | 24 | Remapped | NW_015148966.1 |
NW_017363816.1 | Chr11|NW_017363816.1 | 3 | 3 | Remapped | NW_017363816.1 |
NW_019805495.1 | Chr11|NW_019805495.1 | 27 | 27 | Remapped | NW_019805495.1 |
NW_019805496.1 | Chr11|NW_019805496.1 | 36 | 36 | Remapped | NW_019805496.1 |
NW_019805497.1 | Chr11|NW_019805497.1 | 22 | 22 | Remapped | NW_019805497.1 |
NW_019805498.1 | Chr11|NW_019805498.1 | 9 | 9 | Remapped | NW_019805498.1 |
NT_187658.1 | Chr12|NT_187658.1 | 41 | 41 | Remapped | NT_187658.1 |
NT_187587.1 | Chr12|NT_187587.1 | 29 | 29 | Remapped | NT_187587.1 |
NT_187588.1 | Chr12|NT_187588.1 | 2 | 2 | Remapped | NT_187588.1 |
NT_187589.1 | Chr12|NT_187589.1 | 6 | 6 | Remapped | NT_187589.1 |
NT_187590.1 | Chr12|NT_187590.1 | 12 | 12 | Remapped | NT_187590.1 |
NT_187591.1 | Chr12|NT_187591.1 | 3 | 3 | Remapped | NT_187591.1 |
NW_003315938.1 | Chr12|NW_003315938.1 | 14 | 14 | Remapped | NW_003315938.1 |
NW_003315939.2 | Chr12|NW_003315939.2 | 16 | 16 | Remapped | NW_003315939.2 |
NW_003315940.1 | Chr12|NW_003315940.1 | 11 | 11 | Remapped | NW_003315940.1 |
NW_003315941.1 | Chr12|NW_003315941.1 | 8 | 8 | Remapped | NW_003315941.1 |
NW_003315942.2 | Chr12|NW_003315942.2 | 14 | 14 | Remapped | NW_003315942.2 |
NW_003571049.1 | Chr12|NW_003571049.1 | 12 | 12 | Remapped | NW_003571049.1 |
NW_003571050.1 | Chr12|NW_003571050.1 | 40 | 40 | Remapped | NW_003571050.1 |
NW_009646204.1 | Chr12|NW_009646204.1 | 8 | 8 | Remapped | NW_009646204.1 |
NW_011332696.1 | Chr12|NW_011332696.1 | 43 | 43 | Remapped | NW_011332696.1 |
NW_011332697.1 | Chr12|NW_011332697.1 | 11 | 11 | Remapped | NW_011332697.1 |
NW_013171809.1 | Chr12|NW_013171809.1 | 7 | 7 | Remapped | NW_013171809.1 |
NW_015148967.1 | Chr12|NW_015148967.1 | 29 | 29 | Remapped | NW_015148967.1 |
NW_018654718.1 | Chr12|NW_018654718.1 | 117 | 117 | Remapped | NW_018654718.1 |
NW_018654719.1 | Chr12|NW_018654719.1 | 6 | 6 | Remapped | NW_018654719.1 |
NW_018654720.1 | Chr12|NW_018654720.1 | 26 | 26 | Remapped | NW_018654720.1 |
NW_019805499.1 | Chr12|NW_019805499.1 | 18 | 18 | Remapped | NW_019805499.1 |
NT_187592.1 | Chr13|NT_187592.1 | 32 | 32 | Remapped | NT_187592.1 |
NT_187593.1 | Chr13|NT_187593.1 | 35 | 35 | Remapped | NT_187593.1 |
NT_187595.1 | Chr13|NT_187595.1 | 16 | 16 | Remapped | NT_187595.1 |
NT_187597.1 | Chr13|NT_187597.1 | 9 | 9 | Remapped | NT_187597.1 |
NW_009646205.1 | Chr13|NW_009646205.1 | 4 | 4 | Remapped | NW_009646205.1 |
NW_011332698.1 | Chr13|NW_011332698.1 | 24 | 24 | Remapped | NW_011332698.1 |
NW_011332699.1 | Chr13|NW_011332699.1 | 40 | 40 | Remapped | NW_011332699.1 |
NW_011332700.1 | Chr13|NW_011332700.1 | 15 | 15 | Remapped | NW_011332700.1 |
NW_013171810.1 | Chr13|NW_013171810.1 | 10 | 10 | Remapped | NW_013171810.1 |
NW_013171811.1 | Chr13|NW_013171811.1 | 20 | 20 | Remapped | NW_013171811.1 |
NT_187381.1 | Chr14|NT_187381.1 | 1 | 1 | Remapped | NT_187381.1 |
NT_187598.1 | Chr14|NT_187598.1 | 88 | 88 | Remapped | NT_187598.1 |
NT_187599.1 | Chr14|NT_187599.1 | 27 | 27 | Remapped | NT_187599.1 |
NT_187600.1 | Chr14|NT_187600.1 | 155 | 155 | Remapped | NT_187600.1 |
NT_187601.1 | Chr14|NT_187601.1 | 267 | 267 | Remapped | NT_187601.1 |
NW_018654721.1 | Chr14|NW_018654721.1 | 15 | 15 | Remapped | NW_018654721.1 |
NW_018654722.1 | Chr14|NW_018654722.1 | 124 | 124 | Remapped | NW_018654722.1 |
NT_187659.1 | Chr15|NT_187659.1 | 9 | 9 | Remapped | NT_187659.1 |
NT_187660.1 | Chr15|NT_187660.1 | 286 | 286 | Remapped | NT_187660.1 |
NT_187603.1 | Chr15|NT_187603.1 | 20 | 20 | Remapped | NT_187603.1 |
NT_187604.1 | Chr15|NT_187604.1 | 4 | 4 | Remapped | NT_187604.1 |
NT_187605.1 | Chr15|NT_187605.1 | 30 | 30 | Remapped | NT_187605.1 |
NT_187606.1 | Chr15|NT_187606.1 | 22 | 22 | Remapped | NT_187606.1 |
NW_003315943.1 | Chr15|NW_003315943.1 | 1 | 1 | Remapped | NW_003315943.1 |
NW_003315944.2 | Chr15|NW_003315944.2 | 42 | 42 | Remapped | NW_003315944.2 |
NW_011332701.1 | Chr15|NW_011332701.1 | 289 | 289 | Remapped | NW_011332701.1 |
NW_012132920.1 | Chr15|NW_012132920.1 | 8 | 8 | Remapped | NW_012132920.1 |
NT_187607.1 | Chr16|NT_187607.1 | 192 | 192 | Remapped | NT_187607.1 |
NT_187608.1 | Chr16|NT_187608.1 | 16 | 16 | Remapped | NT_187608.1 |
NT_187609.1 | Chr16|NT_187609.1 | 7 | 7 | Remapped | NT_187609.1 |
NT_187610.1 | Chr16|NT_187610.1 | 9 | 9 | Remapped | NT_187610.1 |
NW_003315945.1 | Chr16|NW_003315945.1 | 12 | 12 | Remapped | NW_003315945.1 |
NW_003315946.1 | Chr16|NW_003315946.1 | 7 | 7 | Remapped | NW_003315946.1 |
NW_012132921.1 | Chr16|NW_012132921.1 | 7 | 7 | Remapped | NW_012132921.1 |
NW_013171812.1 | Chr16|NW_013171812.1 | 6 | 6 | Remapped | NW_013171812.1 |
NW_013171813.1 | Chr16|NW_013171813.1 | 29 | 29 | Remapped | NW_013171813.1 |
NW_017852933.1 | Chr16|NW_017852933.1 | 78 | 78 | Remapped | NW_017852933.1 |
NW_018654723.1 | Chr16|NW_018654723.1 | 11 | 11 | Remapped | NW_018654723.1 |
NW_019805500.1 | Chr16|NW_019805500.1 | 63 | 63 | Remapped | NW_019805500.1 |
NT_187661.1 | Chr17|NT_187661.1 | 38 | 38 | Remapped | NT_187661.1 |
NT_187662.1 | Chr17|NT_187662.1 | 9 | 9 | Remapped | NT_187662.1 |
NT_187663.1 | Chr17|NT_187663.1 | 114 | 114 | Remapped | NT_187663.1 |
NT_187664.1 | Chr17|NT_187664.1 | 28 | 28 | Remapped | NT_187664.1 |
NW_003871093.1 | Chr17|NW_003871093.1 | 13 | 13 | Remapped | NW_003871093.1 |
NT_167251.2 | Chr17|NT_167251.2 | 86 | 86 | Remapped | NT_167251.2 |
NT_187611.1 | Chr17|NT_187611.1 | 23 | 23 | Remapped | NT_187611.1 |
NT_187612.1 | Chr17|NT_187612.1 | 23 | 23 | Remapped | NT_187612.1 |
NT_187613.1 | Chr17|NT_187613.1 | 65 | 65 | Remapped | NT_187613.1 |
NT_187614.1 | Chr17|NT_187614.1 | 284 | 284 | Remapped | NT_187614.1 |
NT_187615.1 | Chr17|NT_187615.1 | 18 | 18 | Remapped | NT_187615.1 |
NT_187616.1 | Chr17|NT_187616.1 | 34 | 34 | Remapped | NT_187616.1 |
NW_003315952.3 | Chr17|NW_003315952.3 | 25 | 25 | Remapped | NW_003315952.3 |
NW_003315953.2 | Chr17|NW_003315953.2 | 7 | 7 | Remapped | NW_003315953.2 |
NW_003315954.1 | Chr17|NW_003315954.1 | 35 | 35 | Remapped | NW_003315954.1 |
NW_003315955.1 | Chr17|NW_003315955.1 | 12 | 12 | Remapped | NW_003315955.1 |
NW_003871091.1 | Chr17|NW_003871091.1 | 22 | 22 | Remapped | NW_003871091.1 |
NW_003871092.1 | Chr17|NW_003871092.1 | 10 | 10 | Remapped | NW_003871092.1 |
NW_016107299.1 | Chr17|NW_016107299.1 | 13 | 13 | Remapped | NW_016107299.1 |
NW_017363817.1 | Chr17|NW_017363817.1 | 39 | 39 | Remapped | NW_017363817.1 |
NW_017363818.1 | Chr17|NW_017363818.1 | 36 | 36 | Remapped | NW_017363818.1 |
NW_017363819.1 | Chr17|NW_017363819.1 | 19 | 19 | Remapped | NW_017363819.1 |
NW_019805501.1 | Chr17|NW_019805501.1 | 34 | 34 | Remapped | NW_019805501.1 |
NT_187665.1 | Chr18|NT_187665.1 | 57 | 57 | Remapped | NT_187665.1 |
NT_187666.1 | Chr18|NT_187666.1 | 38 | 38 | Remapped | NT_187666.1 |
NT_187617.1 | Chr18|NT_187617.1 | 39 | 39 | Remapped | NT_187617.1 |
NT_187618.1 | Chr18|NT_187618.1 | 28 | 28 | Remapped | NT_187618.1 |
NW_003315956.1 | Chr18|NW_003315956.1 | 63 | 63 | Remapped | NW_003315956.1 |
NW_003315957.1 | Chr18|NW_003315957.1 | 23 | 23 | Remapped | NW_003315957.1 |
NW_003315958.1 | Chr18|NW_003315958.1 | 54 | 54 | Remapped | NW_003315958.1 |
NW_003315959.1 | Chr18|NW_003315959.1 | 38 | 38 | Remapped | NW_003315959.1 |
NW_003315960.1 | Chr18|NW_003315960.1 | 28 | 28 | Remapped | NW_003315960.1 |
NW_003315961.1 | Chr18|NW_003315961.1 | 40 | 40 | Remapped | NW_003315961.1 |
NW_013171814.1 | Chr18|NW_013171814.1 | 96 | 96 | Remapped | NW_013171814.1 |
NW_014040928.1 | Chr18|NW_014040928.1 | 44 | 44 | Remapped | NW_014040928.1 |
NW_018654724.1 | Chr18|NW_018654724.1 | 14 | 14 | Remapped | NW_018654724.1 |
NW_019805502.1 | Chr18|NW_019805502.1 | 58 | 58 | Remapped | NW_019805502.1 |
NW_019805503.1 | Chr18|NW_019805503.1 | 39 | 39 | Remapped | NW_019805503.1 |
NT_113949.2 | Chr19|NT_113949.2 | 1 | 1 | Remapped | NT_113949.2 |
NT_187636.1 | Chr19|NT_187636.1 | 1 | 1 | Remapped | NT_187636.1 |
NT_187637.1 | Chr19|NT_187637.1 | 1 | 1 | Remapped | NT_187637.1 |
NT_187638.1 | Chr19|NT_187638.1 | 1 | 1 | Remapped | NT_187638.1 |
NT_187639.1 | Chr19|NT_187639.1 | 1 | 1 | Remapped | NT_187639.1 |
NT_187640.1 | Chr19|NT_187640.1 | 1 | 1 | Remapped | NT_187640.1 |
NT_187641.1 | Chr19|NT_187641.1 | 1 | 1 | Remapped | NT_187641.1 |
NT_187642.1 | Chr19|NT_187642.1 | 1 | 1 | Remapped | NT_187642.1 |
NT_187643.1 | Chr19|NT_187643.1 | 1 | 1 | Remapped | NT_187643.1 |
NT_187644.1 | Chr19|NT_187644.1 | 1 | 1 | Remapped | NT_187644.1 |
NT_187645.1 | Chr19|NT_187645.1 | 1 | 1 | Remapped | NT_187645.1 |
NT_187668.1 | Chr19|NT_187668.1 | 1 | 1 | Remapped | NT_187668.1 |
NT_187669.1 | Chr19|NT_187669.1 | 1 | 1 | Remapped | NT_187669.1 |
NT_187670.1 | Chr19|NT_187670.1 | 1 | 1 | Remapped | NT_187670.1 |
NT_187673.1 | Chr19|NT_187673.1 | 1 | 1 | Remapped | NT_187673.1 |
NT_187674.1 | Chr19|NT_187674.1 | 2 | 2 | Remapped | NT_187674.1 |
NT_187675.1 | Chr19|NT_187675.1 | 1 | 1 | Remapped | NT_187675.1 |
NT_187677.1 | Chr19|NT_187677.1 | 1 | 1 | Remapped | NT_187677.1 |
NT_187684.1 | Chr19|NT_187684.1 | 1 | 1 | Remapped | NT_187684.1 |
NT_187685.1 | Chr19|NT_187685.1 | 1 | 1 | Remapped | NT_187685.1 |
NT_187686.1 | Chr19|NT_187686.1 | 1 | 1 | Remapped | NT_187686.1 |
NT_187687.1 | Chr19|NT_187687.1 | 1 | 1 | Remapped | NT_187687.1 |
NT_187693.1 | Chr19|NT_187693.1 | 163 | 163 | Remapped | NT_187693.1 |
NW_003571061.2 | Chr19|NW_003571061.2 | 88 | 88 | Remapped | NW_003571061.2 |
NW_003571057.2 | Chr19|NW_003571057.2 | 64 | 64 | Remapped | NW_003571057.2 |
NW_003571058.2 | Chr19|NW_003571058.2 | 64 | 64 | Remapped | NW_003571058.2 |
NW_003571059.2 | Chr19|NW_003571059.2 | 64 | 64 | Remapped | NW_003571059.2 |
NW_003571060.1 | Chr19|NW_003571060.1 | 108 | 108 | Remapped | NW_003571060.1 |
NW_003571056.2 | Chr19|NW_003571056.2 | 64 | 64 | Remapped | NW_003571056.2 |
NW_003571055.2 | Chr19|NW_003571055.2 | 75 | 75 | Remapped | NW_003571055.2 |
NT_187619.1 | Chr19|NT_187619.1 | 2 | 2 | Remapped | NT_187619.1 |
NT_187620.1 | Chr19|NT_187620.1 | 14 | 14 | Remapped | NT_187620.1 |
NT_187621.1 | Chr19|NT_187621.1 | 2 | 2 | Remapped | NT_187621.1 |
NT_187622.1 | Chr19|NT_187622.1 | 7 | 7 | Remapped | NT_187622.1 |
NW_003315962.1 | Chr19|NW_003315962.1 | 29 | 29 | Remapped | NW_003315962.1 |
NW_003315963.1 | Chr19|NW_003315963.1 | 13 | 13 | Remapped | NW_003315963.1 |
NW_003315964.2 | Chr19|NW_003315964.2 | 8 | 8 | Remapped | NW_003315964.2 |
NW_003315965.1 | Chr19|NW_003315965.1 | 15 | 15 | Remapped | NW_003315965.1 |
NW_003571054.1 | Chr19|NW_003571054.1 | 108 | 108 | Remapped | NW_003571054.1 |
NW_009646206.1 | Chr19|NW_009646206.1 | 40 | 40 | Remapped | NW_009646206.1 |
NW_014040929.1 | Chr19|NW_014040929.1 | 38 | 38 | Remapped | NW_014040929.1 |
NT_187623.1 | Chr20|NT_187623.1 | 45 | 45 | Remapped | NT_187623.1 |
NT_187624.1 | Chr20|NT_187624.1 | 64 | 64 | Remapped | NT_187624.1 |
NT_187625.1 | Chr20|NT_187625.1 | 14 | 14 | Remapped | NT_187625.1 |
NW_003315966.2 | Chr20|NW_003315966.2 | 46 | 46 | Remapped | NW_003315966.2 |
NT_187626.1 | Chr21|NT_187626.1 | 12 | 12 | Remapped | NT_187626.1 |
NT_187627.1 | Chr21|NT_187627.1 | 15 | 15 | Remapped | NT_187627.1 |
NT_187628.1 | Chr21|NT_187628.1 | 17 | 17 | Remapped | NT_187628.1 |
NW_003315967.2 | Chr21|NW_003315967.2 | 6 | 6 | Remapped | NW_003315967.2 |
NW_003315968.2 | Chr21|NW_003315968.2 | 17 | 17 | Remapped | NW_003315968.2 |
NW_003315969.2 | Chr21|NW_003315969.2 | 8 | 8 | Remapped | NW_003315969.2 |
NW_003315970.2 | Chr21|NW_003315970.2 | 18 | 18 | Remapped | NW_003315970.2 |
NT_187682.1 | Chr22|NT_187682.1 | 9 | 9 | Remapped | NT_187682.1 |
NW_015148969.1 | Chr22|NW_015148969.1 | 3 | 3 | Remapped | NW_015148969.1 |
NT_187629.1 | Chr22|NT_187629.1 | 23 | 23 | Remapped | NT_187629.1 |
NT_187630.1 | Chr22|NT_187630.1 | 20 | 20 | Remapped | NT_187630.1 |
NT_187631.1 | Chr22|NT_187631.1 | 13 | 13 | Remapped | NT_187631.1 |
NT_187632.1 | Chr22|NT_187632.1 | 29 | 29 | Remapped | NT_187632.1 |
NT_187633.1 | Chr22|NT_187633.1 | 29 | 29 | Remapped | NT_187633.1 |
NW_003315972.2 | Chr22|NW_003315972.2 | 15 | 15 | Remapped | NW_003315972.2 |
NW_017363820.1 | ChrX|NW_017363820.1 | 27 | 27 | Remapped | NW_017363820.1 |
NT_187635.1 | ChrX|NT_187635.1 | 9 | 9 | Remapped | NT_187635.1 |
NW_009646209.1 | ChrY|NW_009646209.1 | 14 | 14 | Remapped | NW_009646209.1 |
NW_018654726.1 | ChrY|NW_018654726.1 | 2 | 2 | Remapped | NW_018654726.1 |
Sequence ID | Chr | Number of Variant Regions | Number of Variant Calls | Placement type | Link to graphical display |
---|---|---|---|---|---|
NC_000001.10 | Chr1 | 23,948 | 23,948 | Remapped | NC_000001.10 |
NC_000002.11 | Chr2 | 25,330 | 25,330 | Remapped | NC_000002.11 |
NC_000003.11 | Chr3 | 22,390 | 22,390 | Remapped | NC_000003.11 |
NC_000004.11 | Chr4 | 55,831 | 55,831 | Remapped | NC_000004.11 |
NC_000005.9 | Chr5 | 35,990 | 35,990 | Remapped | NC_000005.9 |
NC_000006.11 | Chr6 | 20,015 | 20,015 | Remapped | NC_000006.11 |
NC_000007.13 | Chr7 | 16,421 | 16,421 | Remapped | NC_000007.13 |
NC_000008.10 | Chr8 | 31,432 | 31,432 | Remapped | NC_000008.10 |
NC_000009.11 | Chr9 | 18,278 | 18,278 | Remapped | NC_000009.11 |
NC_000010.10 | Chr10 | 15,524 | 15,524 | Remapped | NC_000010.10 |
NC_000011.9 | Chr11 | 14,336 | 14,336 | Remapped | NC_000011.9 |
NC_000012.11 | Chr12 | 13,953 | 13,953 | Remapped | NC_000012.11 |
NC_000013.10 | Chr13 | 10,980 | 10,980 | Remapped | NC_000013.10 |
NC_000014.8 | Chr14 | 20,815 | 20,815 | Remapped | NC_000014.8 |
NC_000015.9 | Chr15 | 9,068 | 9,068 | Remapped | NC_000015.9 |
NC_000016.9 | Chr16 | 8,763 | 8,763 | Remapped | NC_000016.9 |
NC_000017.10 | Chr17 | 8,537 | 8,537 | Remapped | NC_000017.10 |
NC_000018.9 | Chr18 | 19,810 | 19,810 | Remapped | NC_000018.9 |
NC_000019.9 | Chr19 | 5,867 | 5,867 | Remapped | NC_000019.9 |
NC_000020.10 | Chr20 | 20,199 | 20,199 | Remapped | NC_000020.10 |
NC_000021.8 | Chr21 | 4,734 | 4,734 | Remapped | NC_000021.8 |
NC_000022.10 | Chr22 | 4,125 | 4,125 | Remapped | NC_000022.10 |
NC_000023.10 | ChrX | 8,219 | 8,219 | Remapped | NC_000023.10 |
NC_000024.9 | ChrY | 314 | 314 | Remapped | NC_000024.9 |
NW_003315903.1 | Chr1|NW_003315903.1 | 2 | 2 | Remapped | NW_003315903.1 |
NW_003315905.1 | Chr1|NW_003315905.1 | 16 | 16 | Remapped | NW_003315905.1 |
NW_003315906.1 | Chr1|NW_003315906.1 | 4 | 4 | Remapped | NW_003315906.1 |
NW_003315907.1 | Chr1|NW_003315907.1 | 38 | 38 | Remapped | NW_003315907.1 |
NW_003571030.1 | Chr1|NW_003571030.1 | 12 | 12 | Remapped | NW_003571030.1 |
NW_003871055.3 | Chr1|NW_003871055.3 | 353 | 353 | Remapped | NW_003871055.3 |
NW_003871056.3 | Chr1|NW_003871056.3 | 98 | 98 | Remapped | NW_003871056.3 |
NW_003871057.1 | Chr1|NW_003871057.1 | 70 | 70 | Remapped | NW_003871057.1 |
NW_004070863.1 | Chr1|NW_004070863.1 | 2 | 2 | Remapped | NW_004070863.1 |
NW_003315908.1 | Chr2|NW_003315908.1 | 13 | 13 | Remapped | NW_003315908.1 |
NW_003315909.1 | Chr2|NW_003315909.1 | 24 | 24 | Remapped | NW_003315909.1 |
NW_003571032.1 | Chr2|NW_003571032.1 | 171 | 171 | Remapped | NW_003571032.1 |
NW_003571033.2 | Chr2|NW_003571033.2 | 4 | 4 | Remapped | NW_003571033.2 |
NW_004504299.1 | Chr2|NW_004504299.1 | 88 | 88 | Remapped | NW_004504299.1 |
NW_003315910.1 | Chr3|NW_003315910.1 | 13 | 13 | Remapped | NW_003315910.1 |
NW_003315911.1 | Chr3|NW_003315911.1 | 6 | 6 | Remapped | NW_003315911.1 |
NW_003315912.1 | Chr3|NW_003315912.1 | 2 | 2 | Remapped | NW_003315912.1 |
NW_003315913.1 | Chr3|NW_003315913.1 | 20 | 20 | Remapped | NW_003315913.1 |
NW_003871058.1 | Chr3|NW_003871058.1 | 41 | 41 | Remapped | NW_003871058.1 |
NW_003871059.1 | Chr3|NW_003871059.1 | 3 | 3 | Remapped | NW_003871059.1 |
NW_003871060.1 | Chr3|NW_003871060.1 | 28 | 28 | Remapped | NW_003871060.1 |
NW_004775426.1 | Chr3|NW_004775426.1 | 26 | 26 | Remapped | NW_004775426.1 |
NT_167250.1 | Chr4|NT_167250.1 | 101 | 101 | Remapped | NT_167250.1 |
NW_003315914.1 | Chr4|NW_003315914.1 | 50 | 50 | Remapped | NW_003315914.1 |
NW_003315915.1 | Chr4|NW_003315915.1 | 94 | 94 | Remapped | NW_003315915.1 |
NW_003315916.1 | Chr4|NW_003315916.1 | 41 | 41 | Remapped | NW_003315916.1 |
NW_003571034.1 | Chr4|NW_003571034.1 | 9 | 9 | Remapped | NW_003571034.1 |
NW_003571035.1 | Chr4|NW_003571035.1 | 57 | 57 | Remapped | NW_003571035.1 |
NW_004775427.1 | Chr4|NW_004775427.1 | 109 | 109 | Remapped | NW_004775427.1 |
NW_003315917.2 | Chr5|NW_003315917.2 | 102 | 102 | Remapped | NW_003315917.2 |
NW_003315918.1 | Chr5|NW_003315918.1 | 6 | 6 | Remapped | NW_003315918.1 |
NW_003315919.1 | Chr5|NW_003315919.1 | 45 | 45 | Remapped | NW_003315919.1 |
NW_003315920.1 | Chr5|NW_003315920.1 | 11 | 11 | Remapped | NW_003315920.1 |
NW_003571036.1 | Chr5|NW_003571036.1 | 52 | 52 | Remapped | NW_003571036.1 |
NW_003871061.1 | Chr5|NW_003871061.1 | 41 | 41 | Remapped | NW_003871061.1 |
NW_004775428.1 | Chr5|NW_004775428.1 | 75 | 75 | Remapped | NW_004775428.1 |
NT_113891.2 | Chr6|NT_113891.2 | 661 | 661 | Remapped | NT_113891.2 |
NT_167244.1 | Chr6|NT_167244.1 | 305 | 305 | Remapped | NT_167244.1 |
NT_167245.1 | Chr6|NT_167245.1 | 595 | 595 | Remapped | NT_167245.1 |
NT_167246.1 | Chr6|NT_167246.1 | 596 | 596 | Remapped | NT_167246.1 |
NT_167247.1 | Chr6|NT_167247.1 | 513 | 513 | Remapped | NT_167247.1 |
NT_167248.1 | Chr6|NT_167248.1 | 624 | 624 | Remapped | NT_167248.1 |
NT_167249.1 | Chr6|NT_167249.1 | 580 | 580 | Remapped | NT_167249.1 |
NW_003315921.1 | Chr6|NW_003315921.1 | 8 | 8 | Remapped | NW_003315921.1 |
NW_003871062.1 | Chr6|NW_003871062.1 | 38 | 38 | Remapped | NW_003871062.1 |
NW_003871063.1 | Chr6|NW_003871063.1 | 41 | 41 | Remapped | NW_003871063.1 |
NW_004070866.1 | Chr6|NW_004070866.1 | 27 | 27 | Remapped | NW_004070866.1 |
NW_004166862.1 | Chr6|NW_004166862.1 | 28 | 28 | Remapped | NW_004166862.1 |
NW_004504300.1 | Chr6|NW_004504300.1 | 28 | 28 | Remapped | NW_004504300.1 |
NW_003315922.2 | Chr7|NW_003315922.2 | 9 | 9 | Remapped | NW_003315922.2 |
NW_003571037.1 | Chr7|NW_003571037.1 | 51 | 51 | Remapped | NW_003571037.1 |
NW_003571038.1 | Chr7|NW_003571038.1 | 20 | 20 | Remapped | NW_003571038.1 |
NW_003571039.1 | Chr7|NW_003571039.1 | 33 | 33 | Remapped | NW_003571039.1 |
NW_003571040.1 | Chr7|NW_003571040.1 | 147 | 147 | Remapped | NW_003571040.1 |
NW_003571041.1 | Chr7|NW_003571041.1 | 46 | 46 | Remapped | NW_003571041.1 |
NW_003871064.1 | Chr7|NW_003871064.1 | 276 | 276 | Remapped | NW_003871064.1 |
NW_003871065.1 | Chr7|NW_003871065.1 | 55 | 55 | Remapped | NW_003871065.1 |
NW_004775430.1 | Chr7|NW_004775430.1 | 19 | 19 | Remapped | NW_004775430.1 |
NW_003315923.1 | Chr8|NW_003315923.1 | 50 | 50 | Remapped | NW_003315923.1 |
NW_003315924.1 | Chr8|NW_003315924.1 | 7 | 7 | Remapped | NW_003315924.1 |
NW_003571042.1 | Chr8|NW_003571042.1 | 220 | 220 | Remapped | NW_003571042.1 |
NW_003871066.2 | Chr8|NW_003871066.2 | 14 | 14 | Remapped | NW_003871066.2 |
NW_004775431.1 | Chr8|NW_004775431.1 | 19 | 19 | Remapped | NW_004775431.1 |
NW_003315925.1 | Chr9|NW_003315925.1 | 38 | 38 | Remapped | NW_003315925.1 |
NW_003315927.1 | Chr9|NW_003315927.1 | 3 | 3 | Remapped | NW_003315927.1 |
NW_003315928.1 | Chr9|NW_003315928.1 | 19 | 19 | Remapped | NW_003315928.1 |
NW_003315929.1 | Chr9|NW_003315929.1 | 7 | 7 | Remapped | NW_003315929.1 |
NW_003315930.1 | Chr9|NW_003315930.1 | 35 | 35 | Remapped | NW_003315930.1 |
NW_003315931.1 | Chr9|NW_003315931.1 | 16 | 16 | Remapped | NW_003315931.1 |
NW_003871067.1 | Chr9|NW_003871067.1 | 16 | 16 | Remapped | NW_003871067.1 |
NW_004070867.1 | Chr9|NW_004070867.1 | 1 | 1 | Remapped | NW_004070867.1 |
NW_004070868.1 | Chr9|NW_004070868.1 | 34 | 34 | Remapped | NW_004070868.1 |
NW_004070869.1 | Chr9|NW_004070869.1 | 41 | 41 | Remapped | NW_004070869.1 |
NW_004504301.1 | Chr9|NW_004504301.1 | 34 | 34 | Remapped | NW_004504301.1 |
NW_003315932.1 | Chr10|NW_003315932.1 | 16 | 16 | Remapped | NW_003315932.1 |
NW_003315933.1 | Chr10|NW_003315933.1 | 12 | 12 | Remapped | NW_003315933.1 |
NW_003315934.1 | Chr10|NW_003315934.1 | 13 | 13 | Remapped | NW_003315934.1 |
NW_003315935.1 | Chr10|NW_003315935.1 | 12 | 12 | Remapped | NW_003315935.1 |
NW_003571043.1 | Chr10|NW_003571043.1 | 6 | 6 | Remapped | NW_003571043.1 |
NW_003871068.1 | Chr10|NW_003871068.1 | 136 | 136 | Remapped | NW_003871068.1 |
NW_003871069.1 | Chr10|NW_003871069.1 | 30 | 30 | Remapped | NW_003871069.1 |
NW_003871070.1 | Chr10|NW_003871070.1 | 5 | 5 | Remapped | NW_003871070.1 |
NW_003871071.1 | Chr10|NW_003871071.1 | 50 | 50 | Remapped | NW_003871071.1 |
NW_004070870.1 | Chr10|NW_004070870.1 | 3 | 3 | Remapped | NW_004070870.1 |
NW_004504302.1 | Chr10|NW_004504302.1 | 22 | 22 | Remapped | NW_004504302.1 |
NW_004775432.1 | Chr10|NW_004775432.1 | 94 | 94 | Remapped | NW_004775432.1 |
NW_003315936.1 | Chr11|NW_003315936.1 | 15 | 15 | Remapped | NW_003315936.1 |
NW_003571045.1 | Chr11|NW_003571045.1 | 45 | 45 | Remapped | NW_003571045.1 |
NW_003571046.1 | Chr11|NW_003571046.1 | 42 | 42 | Remapped | NW_003571046.1 |
NW_003871072.2 | Chr11|NW_003871072.2 | 49 | 49 | Remapped | NW_003871072.2 |
NW_003871073.1 | Chr11|NW_003871073.1 | 12 | 12 | Remapped | NW_003871073.1 |
NW_003871074.1 | Chr11|NW_003871074.1 | 16 | 16 | Remapped | NW_003871074.1 |
NW_003871075.1 | Chr11|NW_003871075.1 | 45 | 45 | Remapped | NW_003871075.1 |
NW_003871076.1 | Chr11|NW_003871076.1 | 22 | 22 | Remapped | NW_003871076.1 |
NW_003871077.1 | Chr11|NW_003871077.1 | 11 | 11 | Remapped | NW_003871077.1 |
NW_003871078.1 | Chr11|NW_003871078.1 | 77 | 77 | Remapped | NW_003871078.1 |
NW_003871079.1 | Chr11|NW_003871079.1 | 30 | 30 | Remapped | NW_003871079.1 |
NW_003871080.1 | Chr11|NW_003871080.1 | 19 | 19 | Remapped | NW_003871080.1 |
NW_003871081.1 | Chr11|NW_003871081.1 | 29 | 29 | Remapped | NW_003871081.1 |
NW_003871082.1 | Chr11|NW_003871082.1 | 15 | 15 | Remapped | NW_003871082.1 |
NW_004070871.1 | Chr11|NW_004070871.1 | 99 | 99 | Remapped | NW_004070871.1 |
NW_003315937.1 | Chr12|NW_003315937.1 | 20 | 20 | Remapped | NW_003315937.1 |
NW_003315938.1 | Chr12|NW_003315938.1 | 14 | 14 | Remapped | NW_003315938.1 |
NW_003315939.1 | Chr12|NW_003315939.1 | 16 | 16 | Remapped | NW_003315939.1 |
NW_003315940.1 | Chr12|NW_003315940.1 | 11 | 11 | Remapped | NW_003315940.1 |
NW_003315941.1 | Chr12|NW_003315941.1 | 8 | 8 | Remapped | NW_003315941.1 |
NW_003315942.2 | Chr12|NW_003315942.2 | 14 | 14 | Remapped | NW_003315942.2 |
NW_003571047.1 | Chr12|NW_003571047.1 | 2 | 2 | Remapped | NW_003571047.1 |
NW_003571048.1 | Chr12|NW_003571048.1 | 13 | 13 | Remapped | NW_003571048.1 |
NW_003571050.1 | Chr12|NW_003571050.1 | 21 | 21 | Remapped | NW_003571050.1 |
NW_003871083.2 | Chr12|NW_003871083.2 | 19 | 19 | Remapped | NW_003871083.2 |
NW_004504303.2 | Chr12|NW_004504303.2 | 20 | 20 | Remapped | NW_004504303.2 |
NW_003571051.1 | Chr13|NW_003571051.1 | 1 | 1 | Remapped | NW_003571051.1 |
NW_004166863.1 | Chr14|NW_004166863.1 | 215 | 215 | Remapped | NW_004166863.1 |
NW_003315943.1 | Chr15|NW_003315943.1 | 1 | 1 | Remapped | NW_003315943.1 |
NW_003315944.1 | Chr15|NW_003315944.1 | 42 | 42 | Remapped | NW_003315944.1 |
NW_003871084.1 | Chr15|NW_003871084.1 | 26 | 26 | Remapped | NW_003871084.1 |
NW_003315945.1 | Chr16|NW_003315945.1 | 12 | 12 | Remapped | NW_003315945.1 |
NW_003315946.1 | Chr16|NW_003315946.1 | 7 | 7 | Remapped | NW_003315946.1 |
NW_003871085.1 | Chr16|NW_003871085.1 | 3 | 3 | Remapped | NW_003871085.1 |
NT_167251.1 | Chr17|NT_167251.1 | 88 | 88 | Remapped | NT_167251.1 |
NW_003315947.1 | Chr17|NW_003315947.1 | 60 | 60 | Remapped | NW_003315947.1 |
NW_003315948.2 | Chr17|NW_003315948.2 | 45 | 45 | Remapped | NW_003315948.2 |
NW_003315949.1 | Chr17|NW_003315949.1 | 64 | 64 | Remapped | NW_003315949.1 |
NW_003315950.2 | Chr17|NW_003315950.2 | 136 | 136 | Remapped | NW_003315950.2 |
NW_003315951.1 | Chr17|NW_003315951.1 | 3 | 3 | Remapped | NW_003315951.1 |
NW_003315953.1 | Chr17|NW_003315953.1 | 7 | 7 | Remapped | NW_003315953.1 |
NW_003315954.1 | Chr17|NW_003315954.1 | 35 | 35 | Remapped | NW_003315954.1 |
NW_003315955.1 | Chr17|NW_003315955.1 | 12 | 12 | Remapped | NW_003315955.1 |
NW_003571052.1 | Chr17|NW_003571052.1 | 55 | 55 | Remapped | NW_003571052.1 |
NW_003871086.1 | Chr17|NW_003871086.1 | 18 | 18 | Remapped | NW_003871086.1 |
NW_003871087.1 | Chr17|NW_003871087.1 | 15 | 15 | Remapped | NW_003871087.1 |
NW_003871088.1 | Chr17|NW_003871088.1 | 49 | 49 | Remapped | NW_003871088.1 |
NW_003871089.1 | Chr17|NW_003871089.1 | 28 | 28 | Remapped | NW_003871089.1 |
NW_003871090.1 | Chr17|NW_003871090.1 | 25 | 25 | Remapped | NW_003871090.1 |
NW_003871091.1 | Chr17|NW_003871091.1 | 22 | 22 | Remapped | NW_003871091.1 |
NW_003871092.1 | Chr17|NW_003871092.1 | 3 | 3 | Remapped | NW_003871092.1 |
NW_003871093.1 | Chr17|NW_003871093.1 | 7 | 7 | Remapped | NW_003871093.1 |
NW_004070872.2 | Chr17|NW_004070872.2 | 30 | 30 | Remapped | NW_004070872.2 |
NW_004166864.2 | Chr17|NW_004166864.2 | 20 | 20 | Remapped | NW_004166864.2 |
NW_004775433.1 | Chr17|NW_004775433.1 | 1 | 1 | Remapped | NW_004775433.1 |
NW_003315956.1 | Chr18|NW_003315956.1 | 63 | 63 | Remapped | NW_003315956.1 |
NW_003315957.1 | Chr18|NW_003315957.1 | 23 | 23 | Remapped | NW_003315957.1 |
NW_003315958.1 | Chr18|NW_003315958.1 | 53 | 53 | Remapped | NW_003315958.1 |
NW_003315959.1 | Chr18|NW_003315959.1 | 38 | 38 | Remapped | NW_003315959.1 |
NW_003315960.1 | Chr18|NW_003315960.1 | 28 | 28 | Remapped | NW_003315960.1 |
NW_003315961.1 | Chr18|NW_003315961.1 | 39 | 39 | Remapped | NW_003315961.1 |
NW_003315962.1 | Chr19|NW_003315962.1 | 29 | 29 | Remapped | NW_003315962.1 |
NW_003315963.1 | Chr19|NW_003315963.1 | 13 | 13 | Remapped | NW_003315963.1 |
NW_003315964.2 | Chr19|NW_003315964.2 | 9 | 9 | Remapped | NW_003315964.2 |
NW_003315965.1 | Chr19|NW_003315965.1 | 15 | 15 | Remapped | NW_003315965.1 |
NW_003571053.2 | Chr19|NW_003571053.2 | 25 | 25 | Remapped | NW_003571053.2 |
NW_003571054.1 | Chr19|NW_003571054.1 | 1 | 1 | Remapped | NW_003571054.1 |
NW_003571060.1 | Chr19|NW_003571060.1 | 22 | 22 | Remapped | NW_003571060.1 |
NW_003571061.1 | Chr19|NW_003571061.1 | 16 | 16 | Remapped | NW_003571061.1 |
NW_003871094.1 | Chr19|NW_003871094.1 | 52 | 52 | Remapped | NW_003871094.1 |
NW_004166865.1 | Chr19|NW_004166865.1 | 65 | 65 | Remapped | NW_004166865.1 |
NW_004775434.1 | Chr19|NW_004775434.1 | 51 | 51 | Remapped | NW_004775434.1 |
NW_003315966.1 | Chr20|NW_003315966.1 | 46 | 46 | Remapped | NW_003315966.1 |
NW_003571063.2 | Chr20|NW_003571063.2 | 28 | 28 | Remapped | NW_003571063.2 |
NW_003871095.1 | Chr20|NW_003871095.1 | 1 | 1 | Remapped | NW_003871095.1 |
NW_004504304.1 | Chr20|NW_004504304.1 | 117 | 117 | Remapped | NW_004504304.1 |
NW_003315967.1 | Chr21|NW_003315967.1 | 6 | 6 | Remapped | NW_003315967.1 |
NW_003315968.1 | Chr21|NW_003315968.1 | 18 | 18 | Remapped | NW_003315968.1 |
NW_003315969.1 | Chr21|NW_003315969.1 | 8 | 8 | Remapped | NW_003315969.1 |
NW_003315970.1 | Chr21|NW_003315970.1 | 18 | 18 | Remapped | NW_003315970.1 |
NW_004775435.1 | Chr21|NW_004775435.1 | 31 | 31 | Remapped | NW_004775435.1 |
NW_003315971.2 | Chr22|NW_003315971.2 | 9 | 9 | Remapped | NW_003315971.2 |
NW_003315972.1 | Chr22|NW_003315972.1 | 15 | 15 | Remapped | NW_003315972.1 |
NW_003871096.1 | Chr22|NW_003871096.1 | 16 | 16 | Remapped | NW_003871096.1 |
NW_003871098.1 | ChrX|NW_003871098.1 | 25 | 25 | Remapped | NW_003871098.1 |
NW_003871099.1 | ChrX|NW_003871099.1 | 27 | 27 | Remapped | NW_003871099.1 |
NW_003871100.1 | ChrX|NW_003871100.1 | 17 | 17 | Remapped | NW_003871100.1 |
NW_003871101.3 | ChrX|NW_003871101.3 | 17 | 17 | Remapped | NW_003871101.3 |
NW_003871102.1 | ChrX|NW_003871102.1 | 1 | 1 | Remapped | NW_003871102.1 |
NW_003871103.3 | ChrX|NW_003871103.3 | 134 | 134 | Remapped | NW_003871103.3 |
NW_004070877.1 | ChrX|NW_004070877.1 | 133 | 133 | Remapped | NW_004070877.1 |
NW_004070878.1 | ChrX|NW_004070878.1 | 33 | 33 | Remapped | NW_004070878.1 |
NW_004070879.1 | ChrX|NW_004070879.1 | 22 | 22 | Remapped | NW_004070879.1 |
NW_004070880.2 | ChrX|NW_004070880.2 | 123 | 123 | Remapped | NW_004070880.2 |
NW_004070881.1 | ChrX|NW_004070881.1 | 12 | 12 | Remapped | NW_004070881.1 |
NW_004070882.1 | ChrX|NW_004070882.1 | 24 | 24 | Remapped | NW_004070882.1 |
NW_004070883.1 | ChrX|NW_004070883.1 | 28 | 28 | Remapped | NW_004070883.1 |
NW_004070884.1 | ChrX|NW_004070884.1 | 7 | 7 | Remapped | NW_004070884.1 |
NW_004070885.1 | ChrX|NW_004070885.1 | 18 | 18 | Remapped | NW_004070885.1 |
NW_004070886.1 | ChrX|NW_004070886.1 | 27 | 27 | Remapped | NW_004070886.1 |
NW_004070887.1 | ChrX|NW_004070887.1 | 41 | 41 | Remapped | NW_004070887.1 |
NW_004070888.1 | ChrX|NW_004070888.1 | 42 | 42 | Remapped | NW_004070888.1 |
NW_004070889.1 | ChrX|NW_004070889.1 | 84 | 84 | Remapped | NW_004070889.1 |
NW_004070890.2 | ChrX|NW_004070890.2 | 405 | 405 | Remapped | NW_004070890.2 |
NW_004070891.1 | ChrX|NW_004070891.1 | 110 | 110 | Remapped | NW_004070891.1 |
NW_004070892.1 | ChrX|NW_004070892.1 | 45 | 45 | Remapped | NW_004070892.1 |
NW_004070893.1 | ChrX|NW_004070893.1 | 11 | 11 | Remapped | NW_004070893.1 |
NW_004166866.1 | ChrX|NW_004166866.1 | 21 | 21 | Remapped | NW_004166866.1 |
Sequence ID | Chr | Number of Variant Regions | Number of Variant Calls | Placement type | Link to graphical display |
---|---|---|---|---|---|
NC_000001.8 | Chr1 | 23,980 | 23,980 | Submitted | NC_000001.8 |
NC_000002.9 | Chr2 | 25,346 | 25,346 | Submitted | NC_000002.9 |
NC_000003.9 | Chr3 | 22,390 | 22,390 | Submitted | NC_000003.9 |
NC_000004.9 | Chr4 | 55,876 | 55,876 | Submitted | NC_000004.9 |
NC_000005.8 | Chr5 | 35,996 | 35,996 | Submitted | NC_000005.8 |
NC_000006.9 | Chr6 | 20,017 | 20,017 | Submitted | NC_000006.9 |
NC_000007.11 | Chr7 | 16,483 | 16,483 | Submitted | NC_000007.11 |
NC_000008.9 | Chr8 | 31,512 | 31,512 | Submitted | NC_000008.9 |
NC_000009.9 | Chr9 | 18,280 | 18,280 | Submitted | NC_000009.9 |
NC_000010.8 | Chr10 | 15,525 | 15,525 | Submitted | NC_000010.8 |
NC_000011.8 | Chr11 | 14,357 | 14,357 | Submitted | NC_000011.8 |
NC_000012.9 | Chr12 | 13,968 | 13,968 | Submitted | NC_000012.9 |
NC_000013.9 | Chr13 | 10,980 | 10,980 | Submitted | NC_000013.9 |
NC_000014.7 | Chr14 | 20,816 | 20,816 | Submitted | NC_000014.7 |
NC_000015.8 | Chr15 | 9,072 | 9,072 | Submitted | NC_000015.8 |
NC_000016.8 | Chr16 | 8,763 | 8,763 | Submitted | NC_000016.8 |
NC_000017.9 | Chr17 | 8,670 | 8,670 | Submitted | NC_000017.9 |
NC_000018.8 | Chr18 | 19,810 | 19,810 | Submitted | NC_000018.8 |
NC_000019.8 | Chr19 | 5,967 | 5,967 | Submitted | NC_000019.8 |
NC_000020.9 | Chr20 | 20,199 | 20,199 | Submitted | NC_000020.9 |
NC_000021.7 | Chr21 | 4,734 | 4,734 | Submitted | NC_000021.7 |
NC_000022.8 | Chr22 | 4,125 | 4,125 | Submitted | NC_000022.8 |
NC_000023.8 | ChrX | 8,253 | 8,253 | Submitted | NC_000023.8 |
NC_000024.7 | ChrY | 315 | 315 | Submitted | NC_000024.7 |
Variant Region remap status | Variant Call remap status | ||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Sequence ID | Chr | Variant Regions on source | Perfect | Good | Pass | Fail | Mult | Variant Calls on source | Perfect | Good | Pass | Fail | Mult |
NC_000001.8 | Chr1 | 23,980 | 23,437 | 0 | 0 | 1 | 542 | 23,980 | 23,437 | 0 | 0 | 1 | 542 |
NC_000002.9 | Chr2 | 25,346 | 25,042 | 0 | 3 | 9 | 292 | 25,346 | 25,042 | 0 | 3 | 9 | 292 |
NC_000003.9 | Chr3 | 22,390 | 22,251 | 0 | 0 | 0 | 139 | 22,390 | 22,251 | 0 | 0 | 0 | 139 |
NC_000004.9 | Chr4 | 55,876 | 55,388 | 1 | 7 | 32 | 448 | 55,876 | 55,388 | 1 | 7 | 32 | 448 |
NC_000005.8 | Chr5 | 35,996 | 35,656 | 0 | 2 | 6 | 332 | 35,996 | 35,656 | 0 | 2 | 6 | 332 |
NC_000006.9 | Chr6 | 20,017 | 19,136 | 0 | 0 | 2 | 879 | 20,017 | 19,136 | 0 | 0 | 2 | 879 |
NC_000007.11 | Chr7 | 16,483 | 15,833 | 1 | 3 | 26 | 620 | 16,483 | 15,833 | 1 | 3 | 26 | 620 |
NC_000008.9 | Chr8 | 31,512 | 31,208 | 1 | 7 | 32 | 264 | 31,512 | 31,208 | 1 | 7 | 32 | 264 |
NC_000009.9 | Chr9 | 18,280 | 18,031 | 0 | 0 | 1 | 248 | 18,280 | 18,031 | 0 | 0 | 1 | 248 |
NC_000010.8 | Chr10 | 15,525 | 15,127 | 0 | 0 | 0 | 398 | 15,525 | 15,127 | 0 | 0 | 0 | 398 |
NC_000011.8 | Chr11 | 14,357 | 13,839 | 0 | 0 | 4 | 514 | 14,357 | 13,839 | 0 | 0 | 4 | 514 |
NC_000012.9 | Chr12 | 13,968 | 13,817 | 0 | 2 | 3 | 146 | 13,968 | 13,817 | 0 | 2 | 3 | 146 |
NC_000013.9 | Chr13 | 10,980 | 10,979 | 0 | 0 | 0 | 1 | 10,980 | 10,979 | 0 | 0 | 0 | 1 |
NC_000014.7 | Chr14 | 20,816 | 20,599 | 0 | 1 | 1 | 215 | 20,816 | 20,599 | 0 | 1 | 1 | 215 |
NC_000015.8 | Chr15 | 9,072 | 8,997 | 1 | 1 | 4 | 69 | 9,072 | 8,997 | 1 | 1 | 4 | 69 |
NC_000016.8 | Chr16 | 8,763 | 8,723 | 0 | 0 | 0 | 40 | 8,763 | 8,723 | 0 | 0 | 0 | 40 |
NC_000017.9 | Chr17 | 8,670 | 8,074 | 0 | 1 | 9 | 586 | 8,670 | 8,074 | 0 | 1 | 9 | 586 |
NC_000018.8 | Chr18 | 19,810 | 19,566 | 0 | 0 | 0 | 244 | 19,810 | 19,566 | 0 | 0 | 0 | 244 |
NC_000019.8 | Chr19 | 5,967 | 5,769 | 0 | 1 | 1 | 196 | 5,967 | 5,769 | 0 | 1 | 1 | 196 |
NC_000020.9 | Chr20 | 20,199 | 20,007 | 0 | 0 | 0 | 192 | 20,199 | 20,007 | 0 | 0 | 0 | 192 |
NC_000021.7 | Chr21 | 4,734 | 4,653 | 0 | 0 | 0 | 81 | 4,734 | 4,653 | 0 | 0 | 0 | 81 |
NC_000022.8 | Chr22 | 4,125 | 4,084 | 0 | 1 | 0 | 40 | 4,125 | 4,084 | 0 | 1 | 0 | 40 |
NC_000023.8 | ChrX | 8,253 | 6,856 | 0 | 2 | 11 | 1,384 | 8,253 | 6,856 | 0 | 2 | 11 | 1,384 |
NC_000024.7 | ChrY | 315 | 314 | 0 | 0 | 1 | 0 | 315 | 314 | 0 | 0 | 1 | 0 |
Variant Region remap status | Variant Call remap status | ||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Sequence ID | Chr | Variant Regions on source | Perfect | Good | Pass | Fail | Mult | Variant Calls on source | Perfect | Good | Pass | Fail | Mult |
NC_000001.8 | Chr1 | 23,980 | 23,325 | 8 | 20 | 50 | 577 | 23,980 | 23,325 | 8 | 20 | 50 | 577 |
NC_000002.9 | Chr2 | 25,346 | 24,984 | 1 | 3 | 16 | 342 | 25,346 | 24,984 | 1 | 3 | 16 | 342 |
NC_000003.9 | Chr3 | 22,390 | 21,892 | 3 | 3 | 26 | 466 | 22,390 | 21,892 | 3 | 3 | 26 | 466 |
NC_000004.9 | Chr4 | 55,876 | 54,669 | 1 | 9 | 46 | 1,151 | 55,876 | 54,669 | 1 | 9 | 46 | 1,151 |
NC_000005.8 | Chr5 | 35,996 | 35,304 | 0 | 2 | 10 | 680 | 35,996 | 35,304 | 0 | 2 | 10 | 680 |
NC_000006.9 | Chr6 | 20,017 | 18,920 | 0 | 2 | 5 | 1,090 | 20,017 | 18,920 | 0 | 2 | 5 | 1,090 |
NC_000007.11 | Chr7 | 16,483 | 15,951 | 0 | 2 | 53 | 477 | 16,483 | 15,951 | 0 | 2 | 53 | 477 |
NC_000008.9 | Chr8 | 31,512 | 29,260 | 1 | 11 | 73 | 2,167 | 31,512 | 29,260 | 1 | 11 | 73 | 2,167 |
NC_000009.9 | Chr9 | 18,280 | 18,021 | 0 | 2 | 15 | 242 | 18,280 | 18,021 | 0 | 2 | 15 | 242 |
NC_000010.8 | Chr10 | 15,525 | 15,389 | 0 | 7 | 13 | 116 | 15,525 | 15,389 | 0 | 7 | 13 | 116 |
NC_000011.8 | Chr11 | 14,357 | 13,977 | 1 | 1 | 31 | 347 | 14,357 | 13,977 | 1 | 1 | 31 | 347 |
NC_000012.9 | Chr12 | 13,968 | 13,512 | 0 | 0 | 9 | 447 | 13,968 | 13,512 | 0 | 0 | 9 | 447 |
NC_000013.9 | Chr13 | 10,980 | 10,814 | 0 | 0 | 0 | 166 | 10,980 | 10,814 | 0 | 0 | 0 | 166 |
NC_000014.7 | Chr14 | 20,816 | 20,046 | 4 | 11 | 84 | 671 | 20,816 | 20,046 | 4 | 11 | 84 | 671 |
NC_000015.8 | Chr15 | 9,072 | 8,657 | 1 | 1 | 2 | 411 | 9,072 | 8,657 | 1 | 1 | 2 | 411 |
NC_000016.8 | Chr16 | 8,763 | 8,315 | 5 | 4 | 2 | 437 | 8,763 | 8,315 | 5 | 4 | 2 | 437 |
NC_000017.9 | Chr17 | 8,670 | 7,883 | 0 | 5 | 11 | 771 | 8,670 | 7,883 | 0 | 5 | 11 | 771 |
NC_000018.8 | Chr18 | 19,810 | 19,226 | 0 | 2 | 15 | 567 | 19,810 | 19,226 | 0 | 2 | 15 | 567 |
NC_000019.8 | Chr19 | 5,967 | 5,652 | 2 | 2 | 23 | 288 | 5,967 | 5,652 | 2 | 2 | 23 | 288 |
NC_000020.9 | Chr20 | 20,199 | 20,004 | 0 | 2 | 24 | 169 | 20,199 | 20,004 | 0 | 2 | 24 | 169 |
NC_000021.7 | Chr21 | 4,734 | 4,600 | 0 | 0 | 31 | 103 | 4,734 | 4,600 | 0 | 0 | 31 | 103 |
NC_000022.8 | Chr22 | 4,125 | 3,978 | 1 | 2 | 25 | 119 | 4,125 | 3,978 | 1 | 2 | 25 | 119 |
NC_000023.8 | ChrX | 8,253 | 8,135 | 1 | 11 | 70 | 36 | 8,253 | 8,135 | 1 | 11 | 70 | 36 |
NC_000024.7 | ChrY | 315 | 305 | 0 | 0 | 2 | 8 | 315 | 305 | 0 | 0 | 2 | 8 |
Samplesets
Number of Samplesets: 3
- Sampleset ID:
- 1
- Name:
- TSC
- Description:
- Traces that were generated by The SNP Consortium (TSC) using genomic DNA of 24 diverse humans
- Size:
- 24
- Organisms:
- Homo sapiens
- Sampleset Phenotype(s):
- None reported
Sample ID | Subject ID | Subject Phenotype |
---|---|---|
NA15216 | NA15216 | Not reported |
NA15268 | NA15268 | Not reported |
NA15594 | NA15594 | Not reported |
NA15144 | NA15144 | Not reported |
NA15590 | NA15590 | Not reported |
NA15324 | NA15324 | Not reported |
NA15385 | NA15385 | Not reported |
NA15036 | NA15036 | Not reported |
NA15038 | NA15038 | Not reported |
NA15215 | NA15215 | Not reported |
NA15223 | NA15223 | Not reported |
NA15227 | NA15227 | Not reported |
NA15386 | NA15386 | Not reported |
NA15224 | NA15224 | Not reported |
NA15242 | NA15242 | Not reported |
NA15072 | NA15072 | Not reported |
NA15213 | NA15213 | Not reported |
NA15029 | NA15029 | Not reported |
NA15056 | NA15056 | Not reported |
NA15236 | NA15236 | Not reported |
NA15221 | NA15221 | Not reported |
NA15510 | NA15510 | Not reported |
NA15245 | NA15245 | Not reported |
NA15226 | NA15226 | Not reported |
- Sampleset ID:
- 2
- Name:
- WGS
- Description:
- Whole genome shotgun (WGS) traces that were generated by the HapMap Consortium using genomic DNA of eight African Americans
- Size:
- 8 (sample data not available)
- Organisms:
- Homo sapiens
- Sampleset Phenotype(s):
- None reported
- Sampleset ID:
- 3
- Name:
- WCS
- Description:
- Traces that were generated from whole chromosome 20 shotgun (WCS) by the Sanger Center from four diverse humans
- Size:
- 4 (sample data not available)
- Organisms:
- Homo sapiens
- Sampleset Phenotype(s):
- None reported
Experimental Details
Experiment ID | Type | Method | Analysis | Number of Variant Calls |
---|---|---|---|---|
1 | Discovery | Sequencing | Sequence alignment | 415,434 |