nsv1037810
- Organism: Homo sapiens
- Study:nstd100 (Coe et al. 2014)
- Variant Type:copy number variation
- Method Type:SNP array
- Submitted on:NCBI36 (hg18)
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:225,868
- Publication(s):Coe et al. 2014
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 853 SVs from 92 studies. See in: genome view
Overlapping variant regions from other studies: 849 SVs from 92 studies. See in: genome view
Overlapping variant regions from other studies: 265 SVs from 25 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nsv1037810 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000011.10 | Chr11 | 67,743,143 | 67,969,010 |
| nsv1037810 | Remapped | Perfect | GRCh37.p13 | Primary Assembly | First Pass | NC_000011.9 | Chr11 | 67,510,614 | 67,736,481 |
| nsv1037810 | Submitted genomic | NCBI36 (hg18) | Primary Assembly | NC_000011.8 | Chr11 | 67,267,190 | 67,493,057 |
Variant Call Information
| Variant Call ID | Type | Method | Analysis |
|---|---|---|---|
| nssv3504316 | copy number loss | SNP array | Probe signal intensity |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nssv3504316 | Remapped | Perfect | NC_000011.10:g.(?_ 67743143)_(6796901 0_?)del | GRCh38.p12 | First Pass | NC_000011.10 | Chr11 | 67,743,143 | 67,969,010 |
| nssv3504316 | Remapped | Perfect | NC_000011.9:g.(?_6 7510614)_(67736481 _?)del | GRCh37.p13 | First Pass | NC_000011.9 | Chr11 | 67,510,614 | 67,736,481 |
| nssv3504316 | Submitted genomic | NC_000011.8:g.(?_6 7267190)_(67493057 _?)del | NCBI36 (hg18) | NC_000011.8 | Chr11 | 67,267,190 | 67,493,057 |