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nsv2783812

  • Variant Calls:2
  • Validation:Not tested
  • Clinical Assertions: No
  • Region Size:45,187

Links to Other Resources

Source: NCBI

Genome View

Select assembly:
Overlapping variant regions from other studies: 263 SVs from 41 studies. See in: genome view    
Remapped(Score: Perfect):31,761,582-31,806,767Question Mark
Overlapping variant regions from other studies: 66 SVs from 12 studies. See in: genome view    
Remapped(Score: Good):3,103,471-3,148,657Question Mark
Overlapping variant regions from other studies: 55 SVs from 12 studies. See in: genome view    
Remapped(Score: Pass):3,060,874-3,094,270Question Mark
Overlapping variant regions from other studies: 67 SVs from 12 studies. See in: genome view    
Remapped(Score: Good):3,009,356-3,054,542Question Mark
Overlapping variant regions from other studies: 70 SVs from 12 studies. See in: genome view    
Remapped(Score: Perfect):3,094,194-3,139,379Question Mark
Overlapping variant regions from other studies: 263 SVs from 41 studies. See in: genome view    
Remapped(Score: Perfect):31,729,359-31,774,544Question Mark
Overlapping variant regions from other studies: 67 SVs from 12 studies. See in: genome view    
Remapped(Score: Good):3,014,941-3,060,127Question Mark
Overlapping variant regions from other studies: 66 SVs from 12 studies. See in: genome view    
Remapped(Score: Good):3,109,056-3,154,242Question Mark
Overlapping variant regions from other studies: 55 SVs from 12 studies. See in: genome view    
Remapped(Score: Pass):3,060,172-3,093,568Question Mark
Overlapping variant regions from other studies: 70 SVs from 12 studies. See in: genome view    
Remapped(Score: Perfect):3,044,110-3,089,295Question Mark
Overlapping variant regions from other studies: 75 SVs from 12 studies. See in: genome view    
Submitted genomic31,837,338-31,882,523Question Mark

Variant Region Placement Information

Variant Region IDPlacement TypeScoreAssemblyAssembly UnitReciprocitySequence IDChrInner StartInner Stop
nsv2783812RemappedPerfectGRCh38.p12Primary AssemblyFirst PassNC_000006.12Chr631,761,58231,806,767
nsv2783812RemappedGoodGRCh38.p12ALT_REF_LOCI_5Second PassNT_167247.2Chr6|NT_16
7247.2		3,103,4713,148,657
nsv2783812RemappedPassGRCh38.p12ALT_REF_LOCI_7Second PassNT_167249.2Chr6|NT_16
7249.2		3,060,8743,094,270
nsv2783812RemappedGoodGRCh38.p12ALT_REF_LOCI_3Second PassNT_167245.2Chr6|NT_16
7245.2		3,009,3563,054,542
nsv2783812RemappedPerfectGRCh38.p12ALT_REF_LOCI_1Second PassNT_167244.2Chr6|NT_16
7244.2		3,094,1943,139,379
nsv2783812RemappedPerfectGRCh37.p13Primary AssemblyFirst PassNC_000006.11Chr631,729,35931,774,544
nsv2783812RemappedGoodGRCh37.p13ALT_REF_LOCI_3Second PassNT_167245.1Chr6|NT_16
7245.1		3,014,9413,060,127
nsv2783812RemappedGoodGRCh37.p13ALT_REF_LOCI_5Second PassNT_167247.1Chr6|NT_16
7247.1		3,109,0563,154,242
nsv2783812RemappedPassGRCh37.p13ALT_REF_LOCI_7Second PassNT_167249.1Chr6|NT_16
7249.1		3,060,1723,093,568
nsv2783812RemappedPerfectGRCh37.p13ALT_REF_LOCI_1Second PassNT_167244.1Chr6|NT_16
7244.1		3,044,1103,089,295
nsv2783812Submitted genomicNCBI36 (hg18)Primary AssemblyNC_000006.10Chr631,837,33831,882,523

Variant Call Information

Variant Call IDTypeSample IDMethodAnalysisOther Calls in this Sample and Study
nssv13670340copy number lossCGPQ-311SNP arrayGenotyping65
nssv13670341copy number lossCGPQ-229SNP arrayGenotyping98

Variant Call Placement Information

Variant Call IDPlacement TypeScoreHGVSAssemblyReciprocitySequence IDChrInner StartInner Stop
nssv13670340RemappedPassNT_167249.2:g.(?_3
060874)_(3094270_?
)del		GRCh38.p12Second PassNT_167249.2Chr6|NT_16
7249.2		3,060,8743,094,270
nssv13670341RemappedPassNT_167249.2:g.(?_3
060874)_(3094270_?
)del		GRCh38.p12Second PassNT_167249.2Chr6|NT_16
7249.2		3,060,8743,094,270
nssv13670340RemappedGoodNT_167247.2:g.(?_3
103471)_(3148657_?
)del		GRCh38.p12Second PassNT_167247.2Chr6|NT_16
7247.2		3,103,4713,148,657
nssv13670341RemappedGoodNT_167247.2:g.(?_3
103471)_(3148657_?
)del		GRCh38.p12Second PassNT_167247.2Chr6|NT_16
7247.2		3,103,4713,148,657
nssv13670340RemappedGoodNT_167245.2:g.(?_3
009356)_(3054542_?
)del		GRCh38.p12Second PassNT_167245.2Chr6|NT_16
7245.2		3,009,3563,054,542
nssv13670341RemappedGoodNT_167245.2:g.(?_3
009356)_(3054542_?
)del		GRCh38.p12Second PassNT_167245.2Chr6|NT_16
7245.2		3,009,3563,054,542
nssv13670340RemappedPerfectNT_167244.2:g.(?_3
094194)_(3139379_?
)del		GRCh38.p12Second PassNT_167244.2Chr6|NT_16
7244.2		3,094,1943,139,379
nssv13670341RemappedPerfectNT_167244.2:g.(?_3
094194)_(3139379_?
)del		GRCh38.p12Second PassNT_167244.2Chr6|NT_16
7244.2		3,094,1943,139,379
nssv13670340RemappedPerfectNC_000006.12:g.(?_
31761582)_(3180676
7_?)del		GRCh38.p12First PassNC_000006.12Chr631,761,58231,806,767
nssv13670341RemappedPerfectNC_000006.12:g.(?_
31761582)_(3180676
7_?)del		GRCh38.p12First PassNC_000006.12Chr631,761,58231,806,767
nssv13670340RemappedGoodNT_167245.1:g.(?_3
014941)_(3060127_?
)delNT_167245.1:g.
(?_3014941)_(30601
27_?)del		GRCh37.p13Second PassNT_167245.1Chr6|NT_16
7245.1		3,014,9413,060,127
nssv13670341RemappedGoodNT_167245.1:g.(?_3
014941)_(3060127_?
)delNT_167245.1:g.
(?_3014941)_(30601
27_?)del		GRCh37.p13Second PassNT_167245.1Chr6|NT_16
7245.1		3,014,9413,060,127
nssv13670340RemappedPerfectNT_167244.1:g.(?_3
044110)_(3089295_?
)del		GRCh37.p13Second PassNT_167244.1Chr6|NT_16
7244.1		3,044,1103,089,295
nssv13670341RemappedPerfectNT_167244.1:g.(?_3
044110)_(3089295_?
)del		GRCh37.p13Second PassNT_167244.1Chr6|NT_16
7244.1		3,044,1103,089,295
nssv13670340RemappedPassNT_167249.1:g.(?_3
060172)_(3093568_?
)del		GRCh37.p13Second PassNT_167249.1Chr6|NT_16
7249.1		3,060,1723,093,568
nssv13670341RemappedPassNT_167249.1:g.(?_3
060172)_(3093568_?
)del		GRCh37.p13Second PassNT_167249.1Chr6|NT_16
7249.1		3,060,1723,093,568
nssv13670340RemappedGoodNT_167247.1:g.(?_3
109056)_(3154242_?
)delNT_167247.1:g.
(?_3109056)_(31542
42_?)del		GRCh37.p13Second PassNT_167247.1Chr6|NT_16
7247.1		3,109,0563,154,242
nssv13670341RemappedGoodNT_167247.1:g.(?_3
109056)_(3154242_?
)delNT_167247.1:g.
(?_3109056)_(31542
42_?)del		GRCh37.p13Second PassNT_167247.1Chr6|NT_16
7247.1		3,109,0563,154,242
nssv13670340RemappedPerfectNC_000006.11:g.(?_
31729359)_(3177454
4_?)del		GRCh37.p13First PassNC_000006.11Chr631,729,35931,774,544
nssv13670341RemappedPerfectNC_000006.11:g.(?_
31729359)_(3177454
4_?)del		GRCh37.p13First PassNC_000006.11Chr631,729,35931,774,544
nssv13670340Submitted genomicNC_000006.10:g.(?_
31837338)_(3188252
3_?)del		NCBI36 (hg18)NC_000006.10Chr631,837,33831,882,523
nssv13670341Submitted genomicNC_000006.10:g.(?_
31837338)_(3188252
3_?)del		NCBI36 (hg18)NC_000006.10Chr631,837,33831,882,523

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

No genotype data were submitted for this variant

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