nsv4385374
- Organism: Homo sapiens
- Study:nstd173 (Zarrei et al. 2019)
- Variant Type:copy number variation
- Method Type:SNP array
- Submitted on:GRCh37 (hg19)
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:249,856
- Publication(s):Zarrei et al. 2019
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 705 SVs from 67 studies. See in: genome view
Overlapping variant regions from other studies: 708 SVs from 67 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nsv4385374 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000001.11 | Chr1 | 171,736,300 | 171,986,155 |
| nsv4385374 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000001.10 | Chr1 | 171,705,440 | 171,955,295 |
Variant Call Information
| Variant Call ID | Type | Sample ID | Method | Analysis | Other Calls in this Sample and Study |
|---|---|---|---|---|---|
| nssv15653310 | copy number gain | 2-1694-003 | SNP array | Genotyping | 19 |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nssv15653310 | Remapped | Perfect | NC_000001.11:g.(?_ 171736300)_(171986 155_?)dup | GRCh38.p12 | First Pass | NC_000001.11 | Chr1 | 171,736,300 | 171,986,155 |
| nssv15653310 | Submitted genomic | NC_000001.10:g.(?_ 171705440)_(171955 295_?)dup | GRCh37 (hg19) | NC_000001.10 | Chr1 | 171,705,440 | 171,955,295 |