nsv4512522
- Organism: Homo sapiens
- Study:nstd166 (gnomAD Structural Variants)
- Variant Type:mobile element insertion
- Method Type:Sequencing
- Submitted on:GRCh37
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:1
- Publication(s):gnomAD_Structural_Variants
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 39 SVs from 7 studies. See in: genome view
Overlapping variant regions from other studies: 1 SVs from 1 studies. See in: genome view
Overlapping variant regions from other studies: 39 SVs from 7 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Start | Stop |
|---|---|---|---|---|---|---|---|---|---|
| nsv4512522 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000012.12 | Chr12 | 122,139,199 | 122,139,199 |
| nsv4512522 | Remapped | Perfect | GRCh38.p12 | PATCHES | Second Pass | NW_011332697.1 | Chr12|NW_0 11332697.1 | 80,156 | 80,156 |
| nsv4512522 | Submitted genomic | GRCh37.p13 | Primary Assembly | NC_000012.11 | Chr12 | 122,623,746 | 122,623,746 |
Variant Call Information
| Variant Call ID | Type | Method | Analysis |
|---|---|---|---|
| nssv16003155 | alu insertion | Sequencing | Other |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Start | Stop |
|---|---|---|---|---|---|---|---|---|---|
| nssv16003155 | Remapped | Perfect | NW_011332697.1:g.8 0156_80157ins281 | GRCh38.p12 | Second Pass | NW_011332697.1 | Chr12|NW_0 11332697.1 | 80,156 | 80,156 |
| nssv16003155 | Remapped | Perfect | NC_000012.12:g.122 139199_122139200in s281 | GRCh38.p12 | First Pass | NC_000012.12 | Chr12 | 122,139,199 | 122,139,199 |
| nssv16003155 | Submitted genomic | NC_000012.11:g.122 623746_122623747in s281 | GRCh37.p13 | NC_000012.11 | Chr12 | 122,623,746 | 122,623,746 |
No validation data were submitted for this variant
No clinical assertion data were submitted for this variant
Complete genotype and/or allele frequency data for this study can be found on dbVar's FTP site.
Genotype Information
| Variant Call ID | Allele Frequency (AF) | Allele Count (AC) | Allele Number (AN) |
|---|---|---|---|
| nssv16003155 | 9.2e-005 | 2 | 21694 |