nsv4673983
- Organism: Homo sapiens
- Study:nstd102 (Clinical Structural Variants)
- Variant Type:copy number variation
- Method Type:Multiple
- Submitted on:GRCh37
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: Yes
- Region Size:27,353,350
- Description:GRCh37/hg19 4p16.3-15.2(chr4:68345-27423424)x3 AND not provided
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 85376 SVs from 136 studies. See in: genome view
Overlapping variant regions from other studies: 85315 SVs from 136 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nsv4673983 | Remapped | Good | GRCh38.p12 | Primary Assembly | First Pass | NC_000004.12 | Chr4 | 68,453 | 27,421,802 |
| nsv4673983 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000004.11 | Chr4 | 68,345 | 27,423,424 |
Variant Call Information
| Variant Call ID | Type | Method | Analysis | Subject Phenotype | Clinical Interpretation | Source of Interpretation | ClinVar ID | Copy number |
|---|---|---|---|---|---|---|---|---|
| nssv16207938 | copy number gain | Multiple | Multiple | not provided | Pathogenic | ClinVar | RCV001005510.1, VCV000814520.1 | 3 |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nssv16207938 | Remapped | Good | NC_000004.12:g.(?_ 68453)_(27421802_? )dup | GRCh38.p12 | First Pass | NC_000004.12 | Chr4 | 68,453 | 27,421,802 |
| nssv16207938 | Submitted genomic | NC_000004.11:g.(?_ 68345)_(27423424_? )dup | GRCh37 (hg19) | NC_000004.11 | Chr4 | 68,345 | 27,423,424 |
No validation data were submitted for this variant
Clinical Assertions
| Variant Call ID | HGVS | Type | Allele Origin | Subject Phenotype | Clinical Interpretation | Source of Interpretation | ClinVar ID | Copy number |
|---|---|---|---|---|---|---|---|---|
| nssv16207938 | GRCh37: NC_000004.11:g.(?_68345)_(27423424_?)dup | copy number gain | germline | not provided | Pathogenic | ClinVar | RCV001005510.1, VCV000814520.1 | 3 |