nsv4673991
- Organism: Homo sapiens
- Study:nstd102 (Clinical Structural Variants)
- Variant Type:copy number variation
- Method Type:Multiple
- Submitted on:GRCh37
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: Yes
- Region Size:679,630
- Description:GRCh37/hg19 3q25.1(chr3:150534295-151213925)x3 AND not provided
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 1725 SVs from 82 studies. See in: genome view
Overlapping variant regions from other studies: 1727 SVs from 82 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nsv4673991 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000003.12 | Chr3 | 150,816,508 | 151,496,137 |
| nsv4673991 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000003.11 | Chr3 | 150,534,295 | 151,213,925 |
Variant Call Information
| Variant Call ID | Type | Method | Analysis | Subject Phenotype | Clinical Interpretation | Source of Interpretation | ClinVar ID | Copy number |
|---|---|---|---|---|---|---|---|---|
| nssv16206671 | copy number gain | Multiple | Multiple | not provided | Uncertain significance | ClinVar | RCV001005478.1, VCV000814488.1 | 3 |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nssv16206671 | Remapped | Perfect | NC_000003.12:g.(?_ 150816508)_(151496 137_?)dup | GRCh38.p12 | First Pass | NC_000003.12 | Chr3 | 150,816,508 | 151,496,137 |
| nssv16206671 | Submitted genomic | NC_000003.11:g.(?_ 150534295)_(151213 925_?)dup | GRCh37 (hg19) | NC_000003.11 | Chr3 | 150,534,295 | 151,213,925 |
No validation data were submitted for this variant
Clinical Assertions
| Variant Call ID | HGVS | Type | Allele Origin | Subject Phenotype | Clinical Interpretation | Source of Interpretation | ClinVar ID | Copy number |
|---|---|---|---|---|---|---|---|---|
| nssv16206671 | GRCh37: NC_000003.11:g.(?_150534295)_(151213925_?)dup | copy number gain | germline | not provided | Uncertain significance | ClinVar | RCV001005478.1, VCV000814488.1 | 3 |