nsv4675826
- Organism: Homo sapiens
- Study:nstd102 (Clinical Structural Variants)
- Variant Type:copy number variation
- Method Type:Multiple
- Submitted on:GRCh37
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: Yes
- Region Size:1,963,612
- Description:GRCh37/hg19 16p13.3(chr16:2651354-4614965)x3 AND not provided
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 7418 SVs from 118 studies. See in: genome view
Overlapping variant regions from other studies: 7419 SVs from 118 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nsv4675826 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000016.10 | Chr16 | 2,601,353 | 4,564,964 |
| nsv4675826 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000016.9 | Chr16 | 2,651,354 | 4,614,965 |
Variant Call Information
| Variant Call ID | Type | Method | Analysis | Subject Phenotype | Clinical Interpretation | Source of Interpretation | ClinVar ID | Copy number |
|---|---|---|---|---|---|---|---|---|
| nssv16207250 | copy number gain | Multiple | Multiple | not provided | Pathogenic | ClinVar | RCV001006745.1, VCV000815770.1 | 3 |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| nssv16207250 | Remapped | Perfect | NC_000016.10:g.(?_ 2601353)_(4564964_ ?)dup | GRCh38.p12 | First Pass | NC_000016.10 | Chr16 | 2,601,353 | 4,564,964 |
| nssv16207250 | Submitted genomic | NC_000016.9:g.(?_2 651354)_(4614965_? )dup | GRCh37 (hg19) | NC_000016.9 | Chr16 | 2,651,354 | 4,614,965 |
No validation data were submitted for this variant
Clinical Assertions
| Variant Call ID | HGVS | Type | Allele Origin | Subject Phenotype | Clinical Interpretation | Source of Interpretation | ClinVar ID | Copy number |
|---|---|---|---|---|---|---|---|---|
| nssv16207250 | GRCh37: NC_000016.9:g.(?_2651354)_(4614965_?)dup | copy number gain | germline | not provided | Pathogenic | ClinVar | RCV001006745.1, VCV000815770.1 | 3 |