nsv4682627
- Organism: Homo sapiens
- Study:nstd102 (Clinical Structural Variants)
- Variant Type:copy number variation
- Method Type:Multiple
- Submitted on:GRCh37
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: Yes
- Region Size:3,205
- Description:NC_000009.12:g.(?_128537976)_(128541180_?)del AND not provided
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 85 SVs from 22 studies. See in: genome view
Overlapping variant regions from other studies: 85 SVs from 22 studies. See in: genome view
Variant Region Placement Information
Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
---|---|---|---|---|---|---|---|---|---|
nsv4682627 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000009.12 | Chr9 | 128,537,976 | 128,541,180 |
nsv4682627 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000009.11 | Chr9 | 131,300,255 | 131,303,459 |
Variant Call Information
Variant Call ID | Type | Method | Analysis | Subject Phenotype | Clinical Interpretation | Source of Interpretation | ClinVar ID |
---|---|---|---|---|---|---|---|
nssv16213091 | deletion | Multiple | Multiple | not provided | Likely pathogenic | ClinVar | RCV001031148.6, VCV000830522.6 |
Variant Call Placement Information
Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
---|---|---|---|---|---|---|---|---|---|
nssv16213091 | Remapped | Perfect | NC_000009.12:g.(?_ 128537976)_(128541 180_?)del | GRCh38.p12 | First Pass | NC_000009.12 | Chr9 | 128,537,976 | 128,541,180 |
nssv16213091 | Submitted genomic | NC_000009.11:g.(?_ 131300255)_(131303 459_?)del | GRCh37 (hg19) | NC_000009.11 | Chr9 | 131,300,255 | 131,303,459 |
No validation data were submitted for this variant
Clinical Assertions
Variant Call ID | HGVS | Type | Allele Origin | Subject Phenotype | Clinical Interpretation | Source of Interpretation | ClinVar ID |
---|---|---|---|---|---|---|---|
nssv16213091 | GRCh37: NC_000009.11:g.(?_131300255)_(131303459_?)del | deletion | germline | not provided | Likely pathogenic | ClinVar | RCV001031148.6, VCV000830522.6 |