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dbVar

Database of genomic structural variation

nsv4692440

Organism: Homo sapiens

Study:nstd186 (NCBI Curated Common Structural Variants)
Variant Type:mobile element insertion
Method Type:Curated
Submitted on:GRCh37

Variant Calls:1
Validation:Not tested
Clinical Assertions: No
Region Size:1

Description:esv3844079 from 1000 Genomes Consortium Phase 3 Integrated SV. For a full list of variants now included in nstd186, refer to the mapping file provided here.

Links to Other Resources

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 158 SVs from 33 studies. See in: genome view

Remapped(Score: Perfect):26,187,723-26,187,723

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Start	Stop
nsv4692440	Remapped	Perfect	GRCh38.p12	Primary Assembly	First Pass	NC_000006.12	Chr6	26,187,723	26,187,723
nsv4692440	Submitted genomic		GRCh37 (hg19)	Primary Assembly		NC_000006.11	Chr6	26,187,951	26,187,951

Variant Call Information

Variant Call ID	Type	Method	Analysis
nssv16231260	alu insertion	Curated	Curated

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Start	Stop
nssv16231260	Remapped	Perfect	NC_000006.12:g.261 87723_26187724ins?	GRCh38.p12	First Pass	NC_000006.12	Chr6	26,187,723	26,187,723
nssv16231260	Submitted genomic		NC_000006.11:g.261 87951_26187952ins?	GRCh37 (hg19)		NC_000006.11	Chr6	26,187,951	26,187,951

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

Genotype Information

Variant Call ID	Allele Frequency (AF)	Allele Count (AC)	Allele Number (AN)
nssv16231260	0.039	196	5008

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