nsv479988
- Organism: Homo sapiens
- Study:nstd35 (Kidd et al. 2010)
- Variant Type:novel sequence insertion
- Method Type:Sequencing
- Variant is Defined by:GU267494
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:1,439
- Description:This variant by definition has no placement. It represents a contig assembled from multiple read pairs, no part of which could be mapped to assembly NCBI35.
- Publication(s):Kidd et al. 2010
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:
Overlapping variant regions from other studies: 145 SVs from 22 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Sequence ID | Chr | Start | Stop |
|---|---|---|---|---|---|---|---|---|
| nsv479988 | Remapped | Good | GRCh38.p12 | Primary Assembly | NT_005612.17 | Chr3|NT_00 5612.17 | 100,625,017 | 100,626,455 |
| nsv479988 | Remapped | Good | GRCh37.p13 | Primary Assembly | NC_000003.11 | Chr3 | 194,051,320 | 194,052,758 |
Variant Call Information
| Variant Call ID | Type | Method | Analysis |
|---|---|---|---|
| nssv3019930 | novel sequence insertion | Sequencing | One end anchored assembly |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Sequence ID | Chr | Start | Stop |
|---|---|---|---|---|---|---|---|---|
| nssv3019930 | Remapped | Good | NT_005612.17:g.100 625017_100626455in s? | GRCh38.p12 | NT_005612.17 | Chr3|NT_00 5612.17 | 100,625,017 | 100,626,455 |
| nssv3019930 | Remapped | Good | NC_000003.11:g.194 051320_194052758in s? | GRCh37.p13 | NC_000003.11 | Chr3 | 194,051,320 | 194,052,758 |