nsv4899398
- Organism: Homo sapiens
- Study:nstd200 (Abel et al. 2020)
- Variant Type:copy number variation
- Method Type:Sequencing
- Submitted on:GRCh38
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:5,993
- Publication(s):Abel et al. 2020
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 240 SVs from 41 studies. See in: genome view
Overlapping variant regions from other studies: 245 SVs from 41 studies. See in: genome view
Variant Region Placement Information
Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Start | Stop |
---|---|---|---|---|---|---|---|---|---|
nsv4899398 | Submitted genomic | GRCh38 (hg38) | Primary Assembly | NC_000001.11 | Chr1 | 235,343,376 (-66, +135) | 235,349,368 (-136, +74) | ||
nsv4899398 | Remapped | Perfect | GRCh37.p13 | Primary Assembly | First Pass | NC_000001.10 | Chr1 | 235,506,691 (-66, +135) | 235,512,683 (-136, +74) |
Variant Call Information
Variant Call ID | Type | Method | Analysis |
---|---|---|---|
nssv16424857 | deletion | Sequencing | Sequence alignment |
Variant Call Placement Information
Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Start | Stop |
---|---|---|---|---|---|---|---|---|---|
nssv16424857 | Submitted genomic | NC_000001.11:g.(23 5343310_235343511) _(235349232_235349 442)del | GRCh38 (hg38) | NC_000001.11 | Chr1 | 235,343,376 (-66, +135) | 235,349,368 (-136, +74) | ||
nssv16424857 | Remapped | Perfect | NC_000001.10:g.(23 5506625_235506826) _(235512547_235512 757)del | GRCh37.p13 | First Pass | NC_000001.10 | Chr1 | 235,506,691 (-66, +135) | 235,512,683 (-136, +74) |
No validation data were submitted for this variant
No clinical assertion data were submitted for this variant
Genotype Information
Variant Call ID | Allele Frequency (AF) | Allele Count (AC) | Allele Number (AN) |
---|---|---|---|
nssv16424857 | <0.001 | 2 | 29246 |