nsv4945391
- Organism: Homo sapiens
- Study:nstd200 (Abel et al. 2020)
- Variant Type:copy number variation
- Method Type:Sequencing
- Submitted on:GRCh38
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:407
- Publication(s):Abel et al. 2020
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 110 SVs from 24 studies. See in: genome view
Overlapping variant regions from other studies: 110 SVs from 24 studies. See in: genome view
Variant Region Placement Information
Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Start | Stop |
---|---|---|---|---|---|---|---|---|---|
nsv4945391 | Submitted genomic | GRCh38 (hg38) | Primary Assembly | NC_000006.12 | Chr6 | 87,691,244 (-1, +1) | 87,691,650 (-1, +1) | ||
nsv4945391 | Remapped | Perfect | GRCh37.p13 | Primary Assembly | First Pass | NC_000006.11 | Chr6 | 88,400,962 (-1, +1) | 88,401,368 (-1, +1) |
Variant Call Information
Variant Call ID | Type | Method | Analysis |
---|---|---|---|
nssv16493995 | duplication | Sequencing | Sequence alignment |
Variant Call Placement Information
Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Start | Stop |
---|---|---|---|---|---|---|---|---|---|
nssv16493995 | Submitted genomic | NC_000006.12:g.(87 691243_87691245)_( 87691649_87691651) dup | GRCh38 (hg38) | NC_000006.12 | Chr6 | 87,691,244 (-1, +1) | 87,691,650 (-1, +1) | ||
nssv16493995 | Remapped | Perfect | NC_000006.11:g.(88 400961_88400963)_( 88401367_88401369) dup | GRCh37.p13 | First Pass | NC_000006.11 | Chr6 | 88,400,962 (-1, +1) | 88,401,368 (-1, +1) |
No validation data were submitted for this variant
No clinical assertion data were submitted for this variant
Genotype Information
Variant Call ID | Allele Frequency (AF) | Allele Count (AC) | Allele Number (AN) |
---|---|---|---|
nssv16493995 | <0.001 | 1 | 29246 |