nsv4987341
- Organism: Homo sapiens
- Study:nstd200 (Abel et al. 2020)
- Variant Type:copy number variation
- Method Type:Sequencing
- Submitted on:GRCh38
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:1,796
- Publication(s):Abel et al. 2020
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 88 SVs from 21 studies. See in: genome view
Overlapping variant regions from other studies: 88 SVs from 21 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Start | Stop |
|---|---|---|---|---|---|---|---|---|---|
| nsv4987341 | Submitted genomic | GRCh38 (hg38) | Primary Assembly | NC_000011.10 | Chr11 | 75,411,663 (-3, +35) | 75,413,458 (-35, +3) | ||
| nsv4987341 | Remapped | Perfect | GRCh37.p13 | Primary Assembly | First Pass | NC_000011.9 | Chr11 | 75,122,707 (-3, +35) | 75,124,502 (-35, +3) |
Variant Call Information
| Variant Call ID | Type | Method | Analysis |
|---|---|---|---|
| nssv16528181 | deletion | Sequencing | Sequence alignment |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Start | Stop |
|---|---|---|---|---|---|---|---|---|---|
| nssv16528181 | Submitted genomic | NC_000011.10:g.(75 411660_75411698)_( 75413423_75413461) del | GRCh38 (hg38) | NC_000011.10 | Chr11 | 75,411,663 (-3, +35) | 75,413,458 (-35, +3) | ||
| nssv16528181 | Remapped | Perfect | NC_000011.9:g.(751 22704_75122742)_(7 5124467_75124505)d el | GRCh37.p13 | First Pass | NC_000011.9 | Chr11 | 75,122,707 (-3, +35) | 75,124,502 (-35, +3) |
No validation data were submitted for this variant
No clinical assertion data were submitted for this variant
Genotype Information
| Variant Call ID | Allele Frequency (AF) | Allele Count (AC) | Allele Number (AN) |
|---|---|---|---|
| nssv16528181 | <0.001 | 1 | 29246 |