nsv4994558
- Organism: Homo sapiens
- Study:nstd200 (Abel et al. 2020)
- Variant Type:copy number variation
- Method Type:Sequencing
- Submitted on:GRCh38
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:678
- Publication(s):Abel et al. 2020
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 116 SVs from 25 studies. See in: genome view
Overlapping variant regions from other studies: 116 SVs from 25 studies. See in: genome view
Variant Region Placement Information
Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Start | Stop |
---|---|---|---|---|---|---|---|---|---|
nsv4994558 | Submitted genomic | GRCh38 (hg38) | Primary Assembly | NC_000016.10 | Chr16 | 23,496,228 (-2, +2) | 23,496,905 (-1, +1) | ||
nsv4994558 | Remapped | Perfect | GRCh37.p13 | Primary Assembly | First Pass | NC_000016.9 | Chr16 | 23,507,549 (-2, +2) | 23,508,226 (-1, +1) |
Variant Call Information
Variant Call ID | Type | Method | Analysis |
---|---|---|---|
nssv16574276 | duplication | Sequencing | Sequence alignment |
Variant Call Placement Information
Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Start | Stop |
---|---|---|---|---|---|---|---|---|---|
nssv16574276 | Submitted genomic | NC_000016.10:g.(23 496226_23496230)_( 23496904_23496906) dup | GRCh38 (hg38) | NC_000016.10 | Chr16 | 23,496,228 (-2, +2) | 23,496,905 (-1, +1) | ||
nssv16574276 | Remapped | Perfect | NC_000016.9:g.(235 07547_23507551)_(2 3508225_23508227)d up | GRCh37.p13 | First Pass | NC_000016.9 | Chr16 | 23,507,549 (-2, +2) | 23,508,226 (-1, +1) |
No validation data were submitted for this variant
No clinical assertion data were submitted for this variant
Genotype Information
Variant Call ID | Allele Frequency (AF) | Allele Count (AC) | Allele Number (AN) |
---|---|---|---|
nssv16574276 | <0.001 | 3 | 29246 |