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dbVar

Database of genomic structural variation

nsv5389547

Organism: Homo sapiens

Study:nstd186 (NCBI Curated Common Structural Variants)
Variant Type:copy number variation
Method Type:Curated
Submitted on:GRCh37

Variant Calls:1
Validation:Not tested
Clinical Assertions: No
Region Size:290

Description:nsv4839188 from Abel et. al 2020. For a full list of variants now included in nstd186, refer to the mapping file provided here.

Links to Other Resources

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 136 SVs from 35 studies. See in: genome view

Remapped(Score: Perfect):110,618,940-110,619,229

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Start	Stop
nsv5389547	Remapped	Perfect	GRCh38.p12	Primary Assembly	First Pass	NC_000011.10	Chr11	110,618,940	110,619,229
nsv5389547	Submitted genomic		GRCh37 (hg19)	Primary Assembly		NC_000011.9	Chr11	110,489,664	110,489,953

Variant Call Information

Variant Call ID	Type	Method	Analysis
nssv16870561	deletion	Curated	Curated

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Start	Stop
nssv16870561	Remapped	Perfect	NC_000011.10:g.110 618940_110619229de l	GRCh38.p12	First Pass	NC_000011.10	Chr11	110,618,940	110,619,229
nssv16870561	Submitted genomic		NC_000011.9:g.1104 89664_110489953del	GRCh37 (hg19)		NC_000011.9	Chr11	110,489,664	110,489,953

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

Genotype Information

Variant Call ID	Allele Frequency (AF)	Allele Count (AC)	Allele Number (AN)
nssv16870561	0.276	4650	16834

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