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dbVar

Database of genomic structural variation

nsv5392832

Organism: Homo sapiens

Study:nstd186 (NCBI Curated Common Structural Variants)
Variant Type:copy number variation
Method Type:Curated
Submitted on:GRCh37

Variant Calls:1
Validation:Not tested
Clinical Assertions: No
Region Size:1,576

Description:nsv4865554 from Abel et. al 2020. For a full list of variants now included in nstd186, refer to the mapping file provided here.

Links to Other Resources

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 136 SVs from 29 studies. See in: genome view

Remapped(Score: Perfect):37,104,477-37,106,052

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Start	Stop
nsv5392832	Remapped	Perfect	GRCh38.p12	Primary Assembly	First Pass	NC_000020.11	Chr20	37,104,477	37,106,052
nsv5392832	Submitted genomic		GRCh37 (hg19)	Primary Assembly		NC_000020.10	Chr20	35,732,880	35,734,455

Variant Call Information

Variant Call ID	Type	Method	Analysis
nssv16872928	duplication	Curated	Curated

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Start	Stop
nssv16872928	Remapped	Perfect	NC_000020.11:g.371 04477_37106052dup	GRCh38.p12	First Pass	NC_000020.11	Chr20	37,104,477	37,106,052
nssv16872928	Submitted genomic		NC_000020.10:g.357 32880_35734455dup	GRCh37 (hg19)		NC_000020.10	Chr20	35,732,880	35,734,455

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

Genotype Information

Variant Call ID	Allele Frequency (AF)	Allele Count (AC)	Allele Number (AN)
nssv16872928	0.014	231	16834

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