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dbVar

Database of genomic structural variation

nsv5433102

Organism: Homo sapiens

Study:nstd206 (Byrska-Bishop et al. 2022)
Variant Type:copy number variation
Method Type:Sequencing
Submitted on:GRCh38

Variant Calls:1
Validation:Not tested
Clinical Assertions: No
Region Size:103

Publication(s):Byrska-Bishop et al. 2022

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 83 SVs from 21 studies. See in: genome view

Submitted genomic22,635,470-22,635,572

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Start	Stop
nsv5433102	Submitted genomic		GRCh38 (hg38)	Primary Assembly		NC_000001.11	Chr1	22,635,470	22,635,572
nsv5433102	Remapped	Perfect	GRCh37.p13	Primary Assembly	First Pass	NC_000001.10	Chr1	22,961,963	22,962,065

Variant Call Information

Variant Call ID	Type	Method	Analysis
nssv16900095	deletion	Sequencing	Sequence alignment

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Start	Stop
nssv16900095	Submitted genomic		NC_000001.11:g.226 35470_22635572del	GRCh38 (hg38)		NC_000001.11	Chr1	22,635,470	22,635,572
nssv16900095	Remapped	Perfect	NC_000001.10:g.229 61963_22962065del	GRCh37.p13	First Pass	NC_000001.10	Chr1	22,961,963	22,962,065

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

Complete genotype and/or allele frequency data for this study can be found on dbVar's FTP site.

Genotype Information

Variant Call ID	Allele Frequency (AF)	Allele Count (AC)	Allele Number (AN)
nssv16900095	<0.001	2	6404

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