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dbVar

Database of genomic structural variation

nsv5441884

Organism: Homo sapiens

Study:nstd206 (Byrska-Bishop et al. 2022)
Variant Type:copy number variation
Method Type:Sequencing
Submitted on:GRCh38

Variant Calls:1
Validation:Not tested
Clinical Assertions: No
Region Size:121

Publication(s):Byrska-Bishop et al. 2022

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 88 SVs from 27 studies. See in: genome view

Submitted genomic27,388,822-27,388,942

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Start	Stop
nsv5441884	Submitted genomic		GRCh38 (hg38)	Primary Assembly		NC_000003.12	Chr3	27,388,822	27,388,942
nsv5441884	Remapped	Perfect	GRCh37.p13	Primary Assembly	First Pass	NC_000003.11	Chr3	27,430,313	27,430,433

Variant Call Information

Variant Call ID	Type	Method	Analysis
nssv16932122	deletion	Sequencing	Sequence alignment

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Start	Stop
nssv16932122	Submitted genomic		NC_000003.12:g.273 88822_27388942del	GRCh38 (hg38)		NC_000003.12	Chr3	27,388,822	27,388,942
nssv16932122	Remapped	Perfect	NC_000003.11:g.274 30313_27430433del	GRCh37.p13	First Pass	NC_000003.11	Chr3	27,430,313	27,430,433

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

Complete genotype and/or allele frequency data for this study can be found on dbVar's FTP site.

Genotype Information

Variant Call ID	Allele Frequency (AF)	Allele Count (AC)	Allele Number (AN)
nssv16932122	0.091	579	6404

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