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dbVar

Database of genomic structural variation

nsv5520614

Organism: Homo sapiens

Study:nstd206 (Byrska-Bishop et al. 2022)
Variant Type:copy number variation
Method Type:Sequencing
Submitted on:GRCh38

Variant Calls:1
Validation:Not tested
Clinical Assertions: No
Region Size:677

Publication(s):Byrska-Bishop et al. 2022

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 120 SVs from 24 studies. See in: genome view

Submitted genomic37,125,228-37,125,904

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Start	Stop
nsv5520614	Submitted genomic		GRCh38 (hg38)	Primary Assembly		NC_000020.11	Chr20	37,125,228	37,125,904
nsv5520614	Remapped	Perfect	GRCh37.p13	Primary Assembly	First Pass	NC_000020.10	Chr20	35,753,631	35,754,307

Variant Call Information

Variant Call ID	Type	Method	Analysis
nssv17732249	deletion	Sequencing	Sequence alignment

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Start	Stop
nssv17732249	Submitted genomic		NC_000020.11:g.371 25228_37125904del	GRCh38 (hg38)		NC_000020.11	Chr20	37,125,228	37,125,904
nssv17732249	Remapped	Perfect	NC_000020.10:g.357 53631_35754307del	GRCh37.p13	First Pass	NC_000020.10	Chr20	35,753,631	35,754,307

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

Complete genotype and/or allele frequency data for this study can be found on dbVar's FTP site.

Genotype Information

Variant Call ID	Allele Frequency (AF)	Allele Count (AC)	Allele Number (AN)
nssv17732249	0.006	39	6404

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