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dbVar

Database of genomic structural variation

nsv5553324

Organism: Homo sapiens

Study:nstd206 (Byrska-Bishop et al. 2022)
Variant Type:copy number variation
Method Type:Sequencing
Submitted on:GRCh38

Variant Calls:1
Validation:Not tested
Clinical Assertions: No
Region Size:1,027

Publication(s):Byrska-Bishop et al. 2022

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 154 SVs from 25 studies. See in: genome view

Submitted genomic31,979,244-31,980,270

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Start	Stop
nsv5553324	Submitted genomic		GRCh38 (hg38)	Primary Assembly		NC_000021.9	Chr21	31,979,244	31,980,270
nsv5553324	Remapped	Perfect	GRCh37.p13	Primary Assembly	First Pass	NC_000021.8	Chr21	33,351,557	33,352,583

Variant Call Information

Variant Call ID	Type	Method	Analysis
nssv17734675	duplication	Sequencing	Sequence alignment

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Start	Stop
nssv17734675	Submitted genomic		NC_000021.9:g.3197 9244_31980270dup	GRCh38 (hg38)		NC_000021.9	Chr21	31,979,244	31,980,270
nssv17734675	Remapped	Perfect	NC_000021.8:g.3335 1557_33352583dup	GRCh37.p13	First Pass	NC_000021.8	Chr21	33,351,557	33,352,583

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

Complete genotype and/or allele frequency data for this study can be found on dbVar's FTP site.

Genotype Information

Variant Call ID	Allele Frequency (AF)	Allele Count (AC)	Allele Number (AN)
nssv17734675	<0.001	1	6404

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