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dbVar

Database of genomic structural variation

nsv5556395

Organism: Homo sapiens

Study:nstd206 (Byrska-Bishop et al. 2022)
Variant Type:sequence alteration
Method Type:Sequencing
Submitted on:GRCh38

Variant Calls:1
Validation:Not tested
Clinical Assertions: No
Region Size:11

Description:complex variant
Publication(s):Byrska-Bishop et al. 2022

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 130 SVs from 15 studies. See in: genome view

Submitted genomic177,469,137-177,469,147

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Start	Stop
nsv5556395	Submitted genomic		GRCh38 (hg38)	Primary Assembly		NC_000002.12	Chr2	177,469,137	177,469,147
nsv5556395	Remapped	Perfect	GRCh37.p13	Primary Assembly	First Pass	NC_000002.11	Chr2	178,333,865	178,333,875

Variant Call Information

Variant Call ID	Type	Method	Analysis
nssv16921152	sequence alteration	Sequencing	Sequence alignment

Variant Call Placement Information

Variant Call ID	Placement Type	Score	Assembly	Reciprocity	Sequence ID	Chr	Start	Stop
nssv16921152	Submitted genomic		GRCh38 (hg38)		NC_000002.12	Chr2	177,469,137	177,469,147
nssv16921152	Remapped	Perfect	GRCh37.p13	First Pass	NC_000002.11	Chr2	178,333,865	178,333,875

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

Complete genotype and/or allele frequency data for this study can be found on dbVar's FTP site.

Genotype Information

Variant Call ID	Allele Frequency (AF)	Allele Count (AC)	Allele Number (AN)
nssv16921152	<0.001	1	6404

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