Warning: The NCBI web site requires JavaScript to function. more...

dbVar

Database of genomic structural variation

nsv5559505

Organism: Homo sapiens

Study:nstd206 (Byrska-Bishop et al. 2022)
Variant Type:mobile element insertion
Method Type:Sequencing
Submitted on:GRCh38

Variant Calls:1
Validation:Not tested
Clinical Assertions: No
Region Size:52

Publication(s):Byrska-Bishop et al. 2022

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 144 SVs from 34 studies. See in: genome view

Submitted genomic89,785,648-89,785,699

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Start	Stop
nsv5559505	Submitted genomic		GRCh38 (hg38)	Primary Assembly		NC_000004.12	Chr4	89,785,648	89,785,699
nsv5559505	Remapped	Perfect	GRCh37.p13	Primary Assembly	First Pass	NC_000004.11	Chr4	90,706,799	90,706,850

Variant Call Information

Variant Call ID	Type	Method	Analysis
nssv16951679	line1 insertion	Sequencing	Sequence alignment

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Start	Stop
nssv16951679	Submitted genomic		NC_000004.12:g.897 85648_89785699ins6 019	GRCh38 (hg38)		NC_000004.12	Chr4	89,785,648	89,785,699
nssv16951679	Remapped	Perfect	NC_000004.11:g.907 06799_90706850ins6 019	GRCh37.p13	First Pass	NC_000004.11	Chr4	90,706,799	90,706,850

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

Complete genotype and/or allele frequency data for this study can be found on dbVar's FTP site.

Genotype Information

Variant Call ID	Allele Frequency (AF)	Allele Count (AC)	Allele Number (AN)
nssv16951679	0.002	11	6402

You are here: NCBI