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dbVar

Database of genomic structural variation

nsv5581980

Organism: Homo sapiens

Study:nstd207 (Ebert et al. 2021)
Variant Type:copy number variation
Method Type:Sequencing
Submitted on:GRCh38

Variant Calls:1
Validation:Not tested
Clinical Assertions: No
Region Size:11,805

Publication(s):Ebert et al. 2021

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 220 SVs from 46 studies. See in: genome view

Submitted genomic89,659,260-89,671,064

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Start	Stop
nsv5581980	Submitted genomic		GRCh38 (hg38)	Primary Assembly		NC_000004.12	Chr4	89,659,260	89,671,064
nsv5581980	Remapped	Perfect	GRCh37.p13	Primary Assembly	First Pass	NC_000004.11	Chr4	90,580,411	90,592,215

Variant Call Information

Variant Call ID	Type	Sample ID	Method	Analysis	Other Calls in this Sample and Study
nssv17136509	deletion	SAMN00001695	Sequencing	Sequence alignment	6,153

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Start	Stop
nssv17136509	Submitted genomic		NC_000004.12:g.896 59260_89671064delA	GRCh38 (hg38)		NC_000004.12	Chr4	89,659,260	89,671,064
nssv17136509	Remapped	Perfect	NC_000004.11:g.905 80411_90592215delA	GRCh37.p13	First Pass	NC_000004.11	Chr4	90,580,411	90,592,215

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

Genotype and/or allele frequency data can be found on dbVar's FTP site.

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