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dbVar

Database of genomic structural variation

nsv5590989

Organism: Homo sapiens

Study:nstd207 (Ebert et al. 2021)
Variant Type:copy number variation
Method Type:Sequencing
Submitted on:GRCh38

Variant Calls:1
Validation:Not tested
Clinical Assertions: No
Region Size:118

Publication(s):Ebert et al. 2021

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 123 SVs from 38 studies. See in: genome view

Submitted genomic82,889,004-82,889,121

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Start	Stop
nsv5590989	Submitted genomic		GRCh38 (hg38)	Primary Assembly		NC_000011.10	Chr11	82,889,004	82,889,121
nsv5590989	Remapped	Perfect	GRCh37.p13	Primary Assembly	First Pass	NC_000011.9	Chr11	82,600,046	82,600,163

Variant Call Information

Variant Call ID	Type	Sample ID	Method	Analysis	Other Calls in this Sample and Study
nssv17076267	deletion	SAMN00001694	Sequencing	Sequence alignment	8,610

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Start	Stop
nssv17076267	Submitted genomic		NC_000011.10:g.828 89004_82889121delT	GRCh38 (hg38)		NC_000011.10	Chr11	82,889,004	82,889,121
nssv17076267	Remapped	Perfect	NC_000011.9:g.8260 0046_82600163delT	GRCh37.p13	First Pass	NC_000011.9	Chr11	82,600,046	82,600,163

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

Genotype and/or allele frequency data can be found on dbVar's FTP site.

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