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dbVar

Database of genomic structural variation

nsv5599421

Organism: Homo sapiens

Study:nstd207 (Ebert et al. 2021)
Variant Type:copy number variation
Method Type:Sequencing
Submitted on:GRCh38

Variant Calls:1
Validation:Not tested
Clinical Assertions: No
Region Size:171

Publication(s):Ebert et al. 2021

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 232 SVs from 47 studies. See in: genome view

Submitted genomic63,669,644-63,669,814

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Start	Stop
nsv5599421	Submitted genomic		GRCh38 (hg38)	Primary Assembly		NC_000020.11	Chr20	63,669,644	63,669,814
nsv5599421	Remapped	Perfect	GRCh37.p13	Primary Assembly	First Pass	NC_000020.10	Chr20	62,300,997	62,301,167

Variant Call Information

Variant Call ID	Type	Sample ID	Method	Analysis	Other Calls in this Sample and Study
nssv17119175	deletion	SAMN00006580	Sequencing	Sequence alignment	9,409

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Start	Stop
nssv17119175	Submitted genomic		NC_000020.11:g.636 69644_63669814delA	GRCh38 (hg38)		NC_000020.11	Chr20	63,669,644	63,669,814
nssv17119175	Remapped	Perfect	NC_000020.10:g.623 00997_62301167delA	GRCh37.p13	First Pass	NC_000020.10	Chr20	62,300,997	62,301,167

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

Genotype and/or allele frequency data can be found on dbVar's FTP site.

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