nsv5660417
- Organism: Homo sapiens
- Study:nstd207 (Ebert et al. 2021)
- Variant Type:insertion
- Method Type:Sequencing
- Submitted on:GRCh38
- Variant Calls:2
- Validation:Not tested
- Clinical Assertions: No
- Region Size:1
- Publication(s):Ebert et al. 2021
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 159 SVs from 29 studies. See in: genome view
Overlapping variant regions from other studies: 159 SVs from 29 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Start | Stop |
|---|---|---|---|---|---|---|---|---|---|
| nsv5660417 | Submitted genomic | GRCh38 (hg38) | Primary Assembly | NC_000015.10 | Chr15 | 88,897,514 | 88,897,514 | ||
| nsv5660417 | Remapped | Perfect | GRCh37.p13 | Primary Assembly | First Pass | NC_000015.9 | Chr15 | 89,440,745 | 89,440,745 |
Variant Call Information
| Variant Call ID | Type | Sample ID | Method | Analysis | Other Calls in this Sample and Study |
|---|---|---|---|---|---|
| nssv17084364 | insertion | SAMN00006579 | Sequencing | Sequence alignment | 23,265 |
| nssv17093533 | insertion | SAMN00006580 | Sequencing | Sequence alignment | 9,409 |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Start | Stop |
|---|---|---|---|---|---|---|---|---|---|
| nssv17084364 | Submitted genomic | NC_000015.10:g.888 97514_88897515ins1 31 | GRCh38 (hg38) | NC_000015.10 | Chr15 | 88,897,514 | 88,897,514 | ||
| nssv17093533 | Submitted genomic | NC_000015.10:g.888 97514_88897515ins5 3 | GRCh38 (hg38) | NC_000015.10 | Chr15 | 88,897,514 | 88,897,514 | ||
| nssv17084364 | Remapped | Perfect | NC_000015.9:g.8944 0745_89440746ins13 1 | GRCh37.p13 | First Pass | NC_000015.9 | Chr15 | 89,440,745 | 89,440,745 |
| nssv17093533 | Remapped | Perfect | NC_000015.9:g.8944 0745_89440746ins53 | GRCh37.p13 | First Pass | NC_000015.9 | Chr15 | 89,440,745 | 89,440,745 |