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dbVar

Database of genomic structural variation

nsv5667177

Organism: Homo sapiens

Study:nstd207 (Ebert et al. 2021)
Variant Type:copy number variation
Method Type:Sequencing
Submitted on:GRCh38

Variant Calls:1
Validation:Not tested
Clinical Assertions: No
Region Size:193

Publication(s):Ebert et al. 2021

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 84 SVs from 5 studies. See in: genome view

Submitted genomic2,690,658-2,690,850

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Start	Stop
nsv5667177	Submitted genomic		GRCh38 (hg38)	Primary Assembly		NC_000024.10	ChrY	2,690,658	2,690,850
nsv5667177	Remapped	Perfect	GRCh37.p13	Primary Assembly	First Pass	NC_000024.9	ChrY	2,558,699	2,558,891

Variant Call Information

Variant Call ID	Type	Sample ID	Method	Analysis	Other Calls in this Sample and Study
nssv17171201	deletion	HG02011	Sequencing	Sequence alignment	2,906

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Start	Stop
nssv17171201	Submitted genomic		NC_000024.10:g.269 0658_2690850delG	GRCh38 (hg38)		NC_000024.10	ChrY	2,690,658	2,690,850
nssv17171201	Remapped	Perfect	NC_000024.9:g.2558 699_2558891delG	GRCh37.p13	First Pass	NC_000024.9	ChrY	2,558,699	2,558,891

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

Genotype and/or allele frequency data can be found on dbVar's FTP site.

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