nsv5685286
- Organism: Homo sapiens
- Study:nstd211 (Chuang et al. 2021)
- Variant Type:mobile element insertion
- Method Type:Sequencing
- Submitted on:GRCh38
- Variant Calls:2
- Validation:Not tested
- Clinical Assertions: No
- Region Size:1
- Description:Insertion of a Alu mobile element relative to the reference
- Publication(s):Chuang et al. 2021
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 149 SVs from 31 studies. See in: genome view
Overlapping variant regions from other studies: 149 SVs from 31 studies. See in: genome view
Variant Region Placement Information
Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Start | Stop |
---|---|---|---|---|---|---|---|---|---|
nsv5685286 | Submitted genomic | GRCh38 (hg38) | Primary Assembly | NC_000004.12 | Chr4 | 156,848,577 | 156,848,577 | ||
nsv5685286 | Remapped | Perfect | GRCh37.p13 | Primary Assembly | First Pass | NC_000004.11 | Chr4 | 157,769,729 | 157,769,729 |
Variant Call Information
Variant Call ID | Type | Method | Analysis |
---|---|---|---|
nssv17174908 | alu insertion | Sequencing | Other |
nssv17212562 | alu insertion | Sequencing | Other |
Variant Call Placement Information
Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Start | Stop |
---|---|---|---|---|---|---|---|---|---|
nssv17174908 | Submitted genomic | NC_000004.12:g.156 848577_156848578in s280 | GRCh38 (hg38) | NC_000004.12 | Chr4 | 156,848,577 | 156,848,577 | ||
nssv17212562 | Submitted genomic | NC_000004.12:g.156 848577_156848578in s280 | GRCh38 (hg38) | NC_000004.12 | Chr4 | 156,848,577 | 156,848,577 | ||
nssv17174908 | Remapped | Perfect | NC_000004.11:g.157 769729_157769730in s280 | GRCh37.p13 | First Pass | NC_000004.11 | Chr4 | 157,769,729 | 157,769,729 |
nssv17212562 | Remapped | Perfect | NC_000004.11:g.157 769729_157769730in s280 | GRCh37.p13 | First Pass | NC_000004.11 | Chr4 | 157,769,729 | 157,769,729 |