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dbVar

Database of genomic structural variation

nsv5719732

Organism: Homo sapiens

Study:nstd211 (Chuang et al. 2021)
Variant Type:mobile element insertion
Method Type:Sequencing
Submitted on:GRCh38

Variant Calls:2
Validation:Not tested
Clinical Assertions: No
Region Size:1

Description:Insertion of a Alu mobile element relative to the reference
Publication(s):Chuang et al. 2021

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 417 SVs from 26 studies. See in: genome view

Submitted genomic112,656,078-112,656,078

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Start	Stop
nsv5719732	Submitted genomic		GRCh38 (hg38)	Primary Assembly		NC_000023.11	ChrX	112,656,078	112,656,078
nsv5719732	Remapped	Perfect	GRCh37.p13	Primary Assembly	First Pass	NC_000023.10	ChrX	111,899,306	111,899,306

Variant Call Information

Variant Call ID	Type	Method	Analysis
nssv17205616	alu insertion	Sequencing	Other
nssv17232722	alu insertion	Sequencing	Other

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Start	Stop
nssv17205616	Submitted genomic		NC_000023.11:g.112 656078_112656079in s281	GRCh38 (hg38)		NC_000023.11	ChrX	112,656,078	112,656,078
nssv17232722	Submitted genomic		NC_000023.11:g.112 656078_112656079in s281	GRCh38 (hg38)		NC_000023.11	ChrX	112,656,078	112,656,078
nssv17205616	Remapped	Perfect	NC_000023.10:g.111 899306_111899307in s281	GRCh37.p13	First Pass	NC_000023.10	ChrX	111,899,306	111,899,306
nssv17232722	Remapped	Perfect	NC_000023.10:g.111 899306_111899307in s281	GRCh37.p13	First Pass	NC_000023.10	ChrX	111,899,306	111,899,306

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

Genotype and/or allele frequency data can be found on dbVar's FTP site.

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