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dbVar

Database of genomic structural variation

nsv5722671

Organism: Homo sapiens

Study:nstd211 (Chuang et al. 2021)
Variant Type:mobile element insertion
Method Type:Sequencing
Submitted on:GRCh38

Variant Calls:2
Validation:Not tested
Clinical Assertions: No
Region Size:1

Description:Insertion of a L1 mobile element relative to the reference
Publication(s):Chuang et al. 2021

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 182 SVs from 21 studies. See in: genome view

Submitted genomic21,026,920-21,026,920

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Start	Stop
nsv5722671	Submitted genomic		GRCh38 (hg38)	Primary Assembly		NC_000018.10	Chr18	21,026,920	21,026,920
nsv5722671	Remapped	Perfect	GRCh37.p13	Primary Assembly	First Pass	NC_000018.9	Chr18	18,606,881	18,606,881

Variant Call Information

Variant Call ID	Type	Method	Analysis
nssv17240468	line1 insertion	Sequencing	Other
nssv17250779	line1 insertion	Sequencing	Other

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Start	Stop
nssv17240468	Submitted genomic		NC_000018.10:g.210 26920_21026921ins4 72	GRCh38 (hg38)		NC_000018.10	Chr18	21,026,920	21,026,920
nssv17250779	Submitted genomic		NC_000018.10:g.210 26920_21026921ins4 72	GRCh38 (hg38)		NC_000018.10	Chr18	21,026,920	21,026,920
nssv17240468	Remapped	Perfect	NC_000018.9:g.1860 6881_18606882ins47 2	GRCh37.p13	First Pass	NC_000018.9	Chr18	18,606,881	18,606,881
nssv17250779	Remapped	Perfect	NC_000018.9:g.1860 6881_18606882ins47 2	GRCh37.p13	First Pass	NC_000018.9	Chr18	18,606,881	18,606,881

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

Genotype and/or allele frequency data can be found on dbVar's FTP site.

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