nsv5727530
- Organism: Homo sapiens
- Study:nstd211 (Chuang et al. 2021)
- Variant Type:mobile element insertion
- Method Type:Sequencing
- Submitted on:GRCh38
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:1
- Description:Insertion of a L1 mobile element relative to the reference
- Publication(s):Chuang et al. 2021
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 116 SVs from 25 studies. See in: genome view
Overlapping variant regions from other studies: 116 SVs from 25 studies. See in: genome view
Variant Region Placement Information
Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Start | Stop |
---|---|---|---|---|---|---|---|---|---|
nsv5727530 | Submitted genomic | GRCh38 (hg38) | Primary Assembly | NC_000006.12 | Chr6 | 111,800,542 | 111,800,542 | ||
nsv5727530 | Remapped | Perfect | GRCh37.p13 | Primary Assembly | First Pass | NC_000006.11 | Chr6 | 112,121,745 | 112,121,745 |
Variant Call Information
Variant Call ID | Type | Method | Analysis |
---|---|---|---|
nssv17235114 | line1 insertion | Sequencing | Other |
Variant Call Placement Information
Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Start | Stop |
---|---|---|---|---|---|---|---|---|---|
nssv17235114 | Submitted genomic | NC_000006.12:g.111 800542_111800543in s2235 | GRCh38 (hg38) | NC_000006.12 | Chr6 | 111,800,542 | 111,800,542 | ||
nssv17235114 | Remapped | Perfect | NC_000006.11:g.112 121745_112121746in s2235 | GRCh37.p13 | First Pass | NC_000006.11 | Chr6 | 112,121,745 | 112,121,745 |