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dbVar

Database of genomic structural variation

nsv5843506

Organism: Homo sapiens

Study:nstd209 (Almarri et al. 2020)
Variant Type:copy number variation
Method Type:Sequencing
Submitted on:GRCh38

Variant Calls:2
Validation:Not tested
Clinical Assertions: No
Region Size:7,946

Publication(s):Almarri et al. 2020

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 225 SVs from 44 studies. See in: genome view

Submitted genomic82,126,865-82,134,810

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Start	Stop
nsv5843506	Submitted genomic		GRCh38 (hg38)	Primary Assembly		NC_000005.10	Chr5	82,126,865	82,134,810
nsv5843506	Remapped	Perfect	GRCh37.p13	Primary Assembly	First Pass	NC_000005.9	Chr5	81,422,684	81,430,629

Variant Call Information

Variant Call ID	Type	Method	Analysis	Copy number
nssv17498792	copy number variation	Sequencing	Sequence alignment	0
nssv17498793	copy number variation	Sequencing	Sequence alignment	2

Variant Call Placement Information

Variant Call ID	Placement Type	Score	Assembly	Reciprocity	Sequence ID	Chr	Start	Stop
nssv17498792	Submitted genomic		GRCh38 (hg38)		NC_000005.10	Chr5	82,126,865	82,134,810
nssv17498793	Submitted genomic		GRCh38 (hg38)		NC_000005.10	Chr5	82,126,865	82,134,810
nssv17498792	Remapped	Perfect	GRCh37.p13	First Pass	NC_000005.9	Chr5	81,422,684	81,430,629
nssv17498793	Remapped	Perfect	GRCh37.p13	First Pass	NC_000005.9	Chr5	81,422,684	81,430,629

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

Genotype and/or allele frequency data can be found on dbVar's FTP site.

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