nsv5851229
- Organism: Homo sapiens
- Study:nstd209 (Almarri et al. 2020)
- Variant Type:copy number variation
- Method Type:Sequencing
- Submitted on:GRCh38
- Variant Calls:3
- Validation:Not tested
- Clinical Assertions: No
- Region Size:15,552
- Publication(s):Almarri et al. 2020
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 429 SVs from 79 studies. See in: genome view
Overlapping variant regions from other studies: 429 SVs from 79 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Start | Stop |
|---|---|---|---|---|---|---|---|---|---|
| nsv5851229 | Submitted genomic | GRCh38 (hg38) | Primary Assembly | NC_000009.12 | Chr9 | 133,068,666 | 133,084,217 | ||
| nsv5851229 | Remapped | Perfect | GRCh37.p13 | Primary Assembly | First Pass | NC_000009.11 | Chr9 | 135,944,053 | 135,959,604 |
Variant Call Information
| Variant Call ID | Type | Method | Analysis | Copy number |
|---|---|---|---|---|
| nssv17511639 | copy number variation | Sequencing | Sequence alignment | 0 |
| nssv17511640 | copy number variation | Sequencing | Sequence alignment | 2 |
| nssv17511641 | copy number variation | Sequencing | Sequence alignment | 3 |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | Assembly | Reciprocity | Sequence ID | Chr | Start | Stop |
|---|---|---|---|---|---|---|---|---|
| nssv17511639 | Submitted genomic | GRCh38 (hg38) | NC_000009.12 | Chr9 | 133,068,666 | 133,084,217 | ||
| nssv17511640 | Submitted genomic | GRCh38 (hg38) | NC_000009.12 | Chr9 | 133,068,666 | 133,084,217 | ||
| nssv17511641 | Submitted genomic | GRCh38 (hg38) | NC_000009.12 | Chr9 | 133,068,666 | 133,084,217 | ||
| nssv17511639 | Remapped | Perfect | GRCh37.p13 | First Pass | NC_000009.11 | Chr9 | 135,944,053 | 135,959,604 |
| nssv17511640 | Remapped | Perfect | GRCh37.p13 | First Pass | NC_000009.11 | Chr9 | 135,944,053 | 135,959,604 |
| nssv17511641 | Remapped | Perfect | GRCh37.p13 | First Pass | NC_000009.11 | Chr9 | 135,944,053 | 135,959,604 |