nsv5856496
- Organism: Homo sapiens
- Study:nstd209 (Almarri et al. 2020)
- Variant Type:copy number variation
- Method Type:Sequencing
- Submitted on:GRCh38
- Variant Calls:2
- Validation:Not tested
- Clinical Assertions: No
- Region Size:6,000
- Publication(s):Almarri et al. 2020
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 48 SVs from 17 studies. See in: genome view
Overlapping variant regions from other studies: 48 SVs from 17 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Start | Stop |
|---|---|---|---|---|---|---|---|---|---|
| nsv5856496 | Submitted genomic | GRCh38 (hg38) | Primary Assembly | NC_000012.12 | Chr12 | 133,213,316 | 133,219,315 | ||
| nsv5856496 | Remapped | Perfect | GRCh37.p13 | Primary Assembly | First Pass | NC_000012.11 | Chr12 | 133,789,902 | 133,795,901 |
Variant Call Information
| Variant Call ID | Type | Method | Analysis | Copy number |
|---|---|---|---|---|
| nssv17451643 | copy number variation | Sequencing | Sequence alignment | 0 |
| nssv17467431 | copy number variation | Sequencing | Sequence alignment | 2 |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | Assembly | Reciprocity | Sequence ID | Chr | Start | Stop |
|---|---|---|---|---|---|---|---|---|
| nssv17451643 | Submitted genomic | GRCh38 (hg38) | NC_000012.12 | Chr12 | 133,213,316 | 133,219,315 | ||
| nssv17467431 | Submitted genomic | GRCh38 (hg38) | NC_000012.12 | Chr12 | 133,213,316 | 133,219,315 | ||
| nssv17451643 | Remapped | Perfect | GRCh37.p13 | First Pass | NC_000012.11 | Chr12 | 133,789,902 | 133,795,901 |
| nssv17467431 | Remapped | Perfect | GRCh37.p13 | First Pass | NC_000012.11 | Chr12 | 133,789,902 | 133,795,901 |