Warning: The NCBI web site requires JavaScript to function. more...

dbVar

Database of genomic structural variation

nsv5870899

Organism: Homo sapiens

Study:nstd209 (Almarri et al. 2020)
Variant Type:copy number variation
Method Type:Sequencing
Submitted on:GRCh38

Variant Calls:1
Validation:Not tested
Clinical Assertions: No
Region Size:7,474

Publication(s):Almarri et al. 2020

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 314 SVs from 57 studies. See in: genome view

Submitted genomic36,085,581-36,093,054

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Start	Stop
nsv5870899	Submitted genomic		GRCh38 (hg38)	Primary Assembly		NC_000017.11	Chr17	36,085,581	36,093,054
nsv5870899	Remapped	Good	GRCh37.p13	Primary Assembly	Second Pass	NC_000017.10	Chr17	34,412,938	34,420,402

Variant Call Information

Variant Call ID	Type	Method	Analysis	Copy number
nssv17473134	copy number variation	Sequencing	Sequence alignment	2

Variant Call Placement Information

Variant Call ID	Placement Type	Score	Assembly	Reciprocity	Sequence ID	Chr	Start	Stop
nssv17473134	Submitted genomic		GRCh38 (hg38)		NC_000017.11	Chr17	36,085,581	36,093,054
nssv17473134	Remapped	Good	GRCh37.p13	Second Pass	NC_000017.10	Chr17	34,412,938	34,420,402

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

Genotype and/or allele frequency data can be found on dbVar's FTP site.

You are here: NCBI