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dbVar

Database of genomic structural variation

nsv5871400

Organism: Homo sapiens

Study:nstd209 (Almarri et al. 2020)
Variant Type:copy number variation
Method Type:Sequencing
Submitted on:GRCh38

Variant Calls:2
Validation:Not tested
Clinical Assertions: No
Region Size:2,125

Publication(s):Almarri et al. 2020

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 560 SVs from 38 studies. See in: genome view

Submitted genomic79,704,994-79,707,118

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Start	Stop
nsv5871400	Submitted genomic		GRCh38 (hg38)	Primary Assembly		NC_000018.10	Chr18	79,704,994	79,707,118
nsv5871400	Remapped	Perfect	GRCh37.p13	Primary Assembly	First Pass	NC_000018.9	Chr18	77,464,994	77,467,118

Variant Call Information

Variant Call ID	Type	Method	Analysis	Copy number
nssv17472127	copy number variation	Sequencing	Sequence alignment	0
nssv17472128	copy number variation	Sequencing	Sequence alignment	2

Variant Call Placement Information

Variant Call ID	Placement Type	Score	Assembly	Reciprocity	Sequence ID	Chr	Start	Stop
nssv17472127	Submitted genomic		GRCh38 (hg38)		NC_000018.10	Chr18	79,704,994	79,707,118
nssv17472128	Submitted genomic		GRCh38 (hg38)		NC_000018.10	Chr18	79,704,994	79,707,118
nssv17472127	Remapped	Perfect	GRCh37.p13	First Pass	NC_000018.9	Chr18	77,464,994	77,467,118
nssv17472128	Remapped	Perfect	GRCh37.p13	First Pass	NC_000018.9	Chr18	77,464,994	77,467,118

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

Genotype and/or allele frequency data can be found on dbVar's FTP site.

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