nsv5872298
- Organism: Homo sapiens
- Study:nstd209 (Almarri et al. 2020)
- Variant Type:copy number variation
- Method Type:Sequencing
- Submitted on:GRCh38
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:3,681
- Publication(s):Almarri et al. 2020
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 99 SVs from 22 studies. See in: genome view
Overlapping variant regions from other studies: 99 SVs from 22 studies. See in: genome view
Variant Region Placement Information
Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Start | Stop |
---|---|---|---|---|---|---|---|---|---|
nsv5872298 | Submitted genomic | GRCh38 (hg38) | Primary Assembly | NC_000002.12 | Chr2 | 69,716,973 | 69,720,653 | ||
nsv5872298 | Remapped | Perfect | GRCh37.p13 | Primary Assembly | First Pass | NC_000002.11 | Chr2 | 69,944,105 | 69,947,785 |
Variant Call Information
Variant Call ID | Type | Method | Analysis |
---|---|---|---|
nssv17393438 | deletion | Sequencing | Sequence alignment |
Variant Call Placement Information
Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Start | Stop |
---|---|---|---|---|---|---|---|---|---|
nssv17393438 | Submitted genomic | NC_000002.12:g.697 16973_69720653del | GRCh38 (hg38) | NC_000002.12 | Chr2 | 69,716,973 | 69,720,653 | ||
nssv17393438 | Remapped | Perfect | NC_000002.11:g.699 44105_69947785del | GRCh37.p13 | First Pass | NC_000002.11 | Chr2 | 69,944,105 | 69,947,785 |