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dbVar

Database of genomic structural variation

nsv5872548

Organism: Homo sapiens

Study:nstd209 (Almarri et al. 2020)
Variant Type:copy number variation
Method Type:Sequencing
Submitted on:GRCh38

Variant Calls:1
Validation:Not tested
Clinical Assertions: No
Region Size:1,731

Publication(s):Almarri et al. 2020

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 164 SVs from 46 studies. See in: genome view

Submitted genomic16,483,368-16,485,098

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Start	Stop
nsv5872548	Submitted genomic		GRCh38 (hg38)	Primary Assembly		NC_000001.11	Chr1	16,483,368	16,485,098
nsv5872548	Remapped	Perfect	GRCh37.p13	Primary Assembly	First Pass	NC_000001.10	Chr1	16,809,863	16,811,593

Variant Call Information

Variant Call ID	Type	Method	Analysis
nssv17358084	deletion	Sequencing	Sequence alignment

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Start	Stop
nssv17358084	Submitted genomic		NC_000001.11:g.164 83368_16485098del	GRCh38 (hg38)		NC_000001.11	Chr1	16,483,368	16,485,098
nssv17358084	Remapped	Perfect	NC_000001.10:g.168 09863_16811593del	GRCh37.p13	First Pass	NC_000001.10	Chr1	16,809,863	16,811,593

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

Genotype and/or allele frequency data can be found on dbVar's FTP site.

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