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dbVar

Database of genomic structural variation

nsv5882167

Organism: Homo sapiens

Study:nstd209 (Almarri et al. 2020)
Variant Type:copy number variation
Method Type:Sequencing
Submitted on:GRCh38

Variant Calls:1
Validation:Not tested
Clinical Assertions: No
Region Size:273

Publication(s):Almarri et al. 2020

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 105 SVs from 25 studies. See in: genome view

Submitted genomic31,065,489-31,065,761

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Start	Stop
nsv5882167	Submitted genomic		GRCh38 (hg38)	Primary Assembly		NC_000001.11	Chr1	31,065,489	31,065,761
nsv5882167	Remapped	Perfect	GRCh37.p13	Primary Assembly	First Pass	NC_000001.10	Chr1	31,538,336	31,538,608

Variant Call Information

Variant Call ID	Type	Method	Analysis
nssv17353164	deletion	Sequencing	Sequence alignment

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Start	Stop
nssv17353164	Submitted genomic		NC_000001.11:g.310 65489_31065761del	GRCh38 (hg38)		NC_000001.11	Chr1	31,065,489	31,065,761
nssv17353164	Remapped	Perfect	NC_000001.10:g.315 38336_31538608del	GRCh37.p13	First Pass	NC_000001.10	Chr1	31,538,336	31,538,608

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

Genotype and/or allele frequency data can be found on dbVar's FTP site.

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