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dbVar

Database of genomic structural variation

nsv5885834

Organism: Homo sapiens

Study:nstd209 (Almarri et al. 2020)
Variant Type:copy number variation
Method Type:Sequencing
Submitted on:GRCh38

Variant Calls:1
Validation:Not tested
Clinical Assertions: No
Region Size:940

Publication(s):Almarri et al. 2020

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 130 SVs from 27 studies. See in: genome view

Submitted genomic25,773,618-25,774,557

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Start	Stop
nsv5885834	Submitted genomic		GRCh38 (hg38)	Primary Assembly		NC_000002.12	Chr2	25,773,618	25,774,557
nsv5885834	Remapped	Perfect	GRCh37.p13	Primary Assembly	First Pass	NC_000002.11	Chr2	25,996,487	25,997,426

Variant Call Information

Variant Call ID	Type	Method	Analysis
nssv17401376	deletion	Sequencing	Sequence alignment

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Start	Stop
nssv17401376	Submitted genomic		NC_000002.12:g.257 73618_25774557del	GRCh38 (hg38)		NC_000002.12	Chr2	25,773,618	25,774,557
nssv17401376	Remapped	Perfect	NC_000002.11:g.259 96487_25997426del	GRCh37.p13	First Pass	NC_000002.11	Chr2	25,996,487	25,997,426

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

Genotype and/or allele frequency data can be found on dbVar's FTP site.

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