nsv5887519
- Organism: Homo sapiens
- Study:nstd209 (Almarri et al. 2020)
- Variant Type:copy number variation
- Method Type:Sequencing
- Submitted on:GRCh38
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:401,421
- Publication(s):Almarri et al. 2020
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 3345 SVs from 92 studies. See in: genome view
Overlapping variant regions from other studies: 3347 SVs from 92 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Start | Stop |
|---|---|---|---|---|---|---|---|---|---|
| nsv5887519 | Submitted genomic | GRCh38 (hg38) | Primary Assembly | NC_000002.12 | Chr2 | 88,832,762 | 89,234,182 | ||
| nsv5887519 | Remapped | Good | GRCh37.p13 | Primary Assembly | First Pass | NC_000002.11 | Chr2 | 89,132,275 | 89,533,663 |
Variant Call Information
| Variant Call ID | Type | Method | Analysis |
|---|---|---|---|
| nssv17400709 | deletion | Sequencing | Sequence alignment |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Start | Stop |
|---|---|---|---|---|---|---|---|---|---|
| nssv17400709 | Submitted genomic | NC_000002.12:g.888 32762_89234182del | GRCh38 (hg38) | NC_000002.12 | Chr2 | 88,832,762 | 89,234,182 | ||
| nssv17400709 | Remapped | Good | NC_000002.11:g.891 32275_89533663del | GRCh37.p13 | First Pass | NC_000002.11 | Chr2 | 89,132,275 | 89,533,663 |