Warning: The NCBI web site requires JavaScript to function. more...

dbVar

Database of genomic structural variation

nsv5892986

Organism: Homo sapiens

Study:nstd209 (Almarri et al. 2020)
Variant Type:copy number variation
Method Type:Sequencing
Submitted on:GRCh38

Variant Calls:1
Validation:Not tested
Clinical Assertions: No
Region Size:5,698

Publication(s):Almarri et al. 2020

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 241 SVs from 44 studies. See in: genome view

Submitted genomic177,435,913-177,441,610

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Start	Stop
nsv5892986	Submitted genomic		GRCh38 (hg38)	Primary Assembly		NC_000005.10	Chr5	177,435,913	177,441,610
nsv5892986	Remapped	Perfect	GRCh37.p13	Primary Assembly	First Pass	NC_000005.9	Chr5	176,862,914	176,868,611

Variant Call Information

Variant Call ID	Type	Method	Analysis
nssv17425127	deletion	Sequencing	Sequence alignment

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Start	Stop
nssv17425127	Submitted genomic		NC_000005.10:g.177 435913_177441610de l	GRCh38 (hg38)		NC_000005.10	Chr5	177,435,913	177,441,610
nssv17425127	Remapped	Perfect	NC_000005.9:g.1768 62914_176868611del	GRCh37.p13	First Pass	NC_000005.9	Chr5	176,862,914	176,868,611

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

Genotype and/or allele frequency data can be found on dbVar's FTP site.

You are here: NCBI