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dbVar

Database of genomic structural variation

nsv5894786

Organism: Homo sapiens

Study:nstd209 (Almarri et al. 2020)
Variant Type:copy number variation
Method Type:Sequencing
Submitted on:GRCh38

Variant Calls:1
Validation:Not tested
Clinical Assertions: No
Region Size:207

Publication(s):Almarri et al. 2020

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 181 SVs from 31 studies. See in: genome view

Submitted genomic82,819,968-82,820,174

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Start	Stop
nsv5894786	Submitted genomic		GRCh38 (hg38)	Primary Assembly		NC_000004.12	Chr4	82,819,968	82,820,174
nsv5894786	Remapped	Perfect	GRCh37.p13	Primary Assembly	First Pass	NC_000004.11	Chr4	83,741,121	83,741,327

Variant Call Information

Variant Call ID	Type	Method	Analysis
nssv17421992	deletion	Sequencing	Sequence alignment

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Start	Stop
nssv17421992	Submitted genomic		NC_000004.12:g.828 19968_82820174del	GRCh38 (hg38)		NC_000004.12	Chr4	82,819,968	82,820,174
nssv17421992	Remapped	Perfect	NC_000004.11:g.837 41121_83741327del	GRCh37.p13	First Pass	NC_000004.11	Chr4	83,741,121	83,741,327

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

Genotype and/or allele frequency data can be found on dbVar's FTP site.

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