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dbVar

Database of genomic structural variation

nsv5896242

Organism: Homo sapiens

Study:nstd209 (Almarri et al. 2020)
Variant Type:copy number variation
Method Type:Sequencing
Submitted on:GRCh38

Variant Calls:1
Validation:Not tested
Clinical Assertions: No
Region Size:2,729

Publication(s):Almarri et al. 2020

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 200 SVs from 41 studies. See in: genome view

Submitted genomic17,695,982-17,698,710

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Start	Stop
nsv5896242	Submitted genomic		GRCh38 (hg38)	Primary Assembly		NC_000006.12	Chr6	17,695,982	17,698,710
nsv5896242	Remapped	Perfect	GRCh37.p13	Primary Assembly	First Pass	NC_000006.11	Chr6	17,696,213	17,698,941

Variant Call Information

Variant Call ID	Type	Method	Analysis
nssv17413996	deletion	Sequencing	Sequence alignment

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Start	Stop
nssv17413996	Submitted genomic		NC_000006.12:g.176 95982_17698710del	GRCh38 (hg38)		NC_000006.12	Chr6	17,695,982	17,698,710
nssv17413996	Remapped	Perfect	NC_000006.11:g.176 96213_17698941del	GRCh37.p13	First Pass	NC_000006.11	Chr6	17,696,213	17,698,941

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

Genotype and/or allele frequency data can be found on dbVar's FTP site.

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