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dbVar

Database of genomic structural variation

nsv5899267

Organism: Homo sapiens

Study:nstd209 (Almarri et al. 2020)
Variant Type:copy number variation
Method Type:Sequencing
Submitted on:GRCh38

Variant Calls:1
Validation:Not tested
Clinical Assertions: No
Region Size:73,576

Publication(s):Almarri et al. 2020

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 335 SVs from 50 studies. See in: genome view

Submitted genomic42,957,850-43,031,425

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Start	Stop
nsv5899267	Submitted genomic		GRCh38 (hg38)	Primary Assembly		NC_000006.12	Chr6	42,957,850	43,031,425
nsv5899267	Remapped	Perfect	GRCh37.p13	Primary Assembly	First Pass	NC_000006.11	Chr6	42,925,588	42,999,163

Variant Call Information

Variant Call ID	Type	Method	Analysis
nssv17449358	deletion	Sequencing	Sequence alignment

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Start	Stop
nssv17449358	Submitted genomic		NC_000006.12:g.429 57850_43031425del	GRCh38 (hg38)		NC_000006.12	Chr6	42,957,850	43,031,425
nssv17449358	Remapped	Perfect	NC_000006.11:g.429 25588_42999163del	GRCh37.p13	First Pass	NC_000006.11	Chr6	42,925,588	42,999,163

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

Genotype and/or allele frequency data can be found on dbVar's FTP site.

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